HHsearch alignment for GI: 254780240 and conserved domain: TIGR03346

>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.

Probab=95.16  E-value=0.023  Score=35.50  Aligned_cols=34  Identities=26%  Similarity=0.560  Sum_probs=23.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHH------------CCCEECHHHHH
Q ss_conf             69998788999678999999971------------89489578999
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKL------------NVPQLSTGDML   35 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~------------~~~~is~gdll   35 (201)
T Consensus       196 NpiLVGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~~LDlg~Lv  241 (852)
T TIGR03346       196 NPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLKNKRLLALDMGALI  241 (852)
T ss_pred             CCCEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHH
T ss_conf             9721279998799999999999866999978851851275288775