HHsearch alignment for GI: 254780240 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=96.80 E-value=0.00076 Score=44.85 Aligned_cols=20 Identities=35% Similarity=0.775 Sum_probs=9.8
Q ss_pred EECCCCCCHHHHHHHHHHHH
Q ss_conf 98788999678999999971
Q gi|254780240|r 5 FLGPPGSGKGTQACRLSQKL 24 (201)
Q Consensus 5 i~G~PGsGK~T~a~~la~~~ 24 (201)
T Consensus 199 lvGPTGVGKTTTiAKLAa~~ 218 (282)
T TIGR03499 199 LVGPTGVGKTTTLAKLAARF 218 (282)
T ss_pred EECCCCCCHHHHHHHHHHHH
T ss_conf 97788875788999999999