HHsearch alignment for GI: 254780240 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=98.14 E-value=2.6e-05 Score=54.01 Aligned_cols=104 Identities=24% Similarity=0.290 Sum_probs=59.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHH---C--CCEECHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 9998788999678999999971---8--9489578999999960-01456666776413445541035665554202322
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKL---N--VPQLSTGDMLRAEVDR-NTLLGKQVKGSMESGSLISDAIVNQVVCDRIRLPD 76 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~---~--~~~is~gdllR~~~~~-~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~~~ 76 (201)
T Consensus 2 ivl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~~-~d~~~~~~~~~~~~~Ek~~r~~-----------~~~~v~~~l~~~- 68 (249)
T TIGR03574 2 IILTGLPGVGKSTFSKELSKKLSEKNIDNIILG-TDLIRESFPVWKEKYEEFIRDS-----------TLYLIKTALKNK- 68 (249)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEC-CCCCHHHHHHCCHHHHHHHHHH-----------HHHHHHHHHCCC-
T ss_conf 789678999899999999999998299659965-5200212000336779998999-----------999999984337-
Q ss_pred CCCEEEEC------CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 25317863------80111245788876665312522210355542212566423311
Q gi|254780240|r 77 CDSGFILD------GYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRV 128 (201)
Q Consensus 77 ~~~g~ilD------GFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~ 128 (201)
T Consensus 69 --~~vI~D~~nYiKg~RYE------L~clAk~~~-t~~c~I~~~~p~e~c~~~N~~R~ 117 (249)
T TIGR03574 69 --YSVIVDDTNYYNSKRRD------LINIAKEYN-KNYIIIYLKAPLDTLLRRNIERG 117 (249)
T ss_pred --CEEEECCCCHHHHHHHH------HHHHHHHCC-CCEEEEEECCCHHHHHHHHHHCC
T ss_conf --66997273278899999------999999849-98699997399999999876068