HHsearch alignment for GI: 254780240 and conserved domain: cd02026

>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. This enzyme catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=96.15  E-value=0.012  Score=37.44  Aligned_cols=143  Identities=22%  Similarity=0.236  Sum_probs=69.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCC---CEECHHHHH---HHHHHH--HH----------HHHHHHHHHHHCCCCCCCHHH
Q ss_conf             999878899967899999997189---489578999---999960--01----------456666776413445541035
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNV---PQLSTGDML---RAEVDR--NT----------LLGKQVKGSMESGSLISDAIV   64 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~---~~is~gdll---R~~~~~--~s----------~~g~~i~~~l~~G~lvpd~ii   64 (201)
T Consensus         2 IgVaG~SGSGKTTv~~~i~~ifg~~~v~vI~~D~Yhr~dr~~r~~~~~t~~~P~And~dll~~~l~-~Lk~Gk~i~~PvY   80 (273)
T cd02026           2 IGVAGDSGCGKSTFLRRLTSLFGSDLVTVICLDDYHSLDRKGRKETGITALDPRANNFDLMYEQLK-ALKEGQAIEKPIY   80 (273)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHCCCCCCCCCC
T ss_conf             899788878699999999998584876999657778899899987187768975234999999999-9985995343222


Q ss_pred             HHHHHHHHCC---CCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-
Q ss_conf             6655542023---222531786380111245788876665312522210355542212566423311232333455656-
Q gi|254780240|r   65 NQVVCDRIRL---PDCDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRS-  140 (201)
Q Consensus        65 ~~li~~~l~~---~~~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~-  140 (201)
T Consensus        81 -dh~tg~~~~~e~i~p~diII~EGLh~l~~------~~lrd---l~DLkIfVD~d~dlr~~rKI~RD~~ER-----GyS~  145 (273)
T cd02026          81 -NHVTGLIDPPELIKPTKIVVIEGLHPLYD------ERVRE---LLDFSVYLDISDEVKFAWKIQRDMAER-----GHSL  145 (273)
T ss_pred             -CCCCCCCCCCEEECCCCEEEEECEECCCC------HHHHH---HHCEEEEECCCHHHHHHHHHHHHHHHH-----CCCH
T ss_conf             -14589657756506874799922000266------88986---607468856876479999877667664-----8899


Q ss_pred             CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             789899999999999975699
Q gi|254780240|r  141 DDKYDVFLKRIENYRKTILPL  161 (201)
Q Consensus       141 DD~~e~i~~Rl~~y~~~~~pv  161 (201)
T Consensus       146 E~V~~~I~rR~pDy~~yI~PQ  166 (273)
T cd02026         146 EDVLASIEARKPDFEAYIDPQ  166 (273)
T ss_pred             HHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999986047889750757