HHsearch alignment for GI: 254780240 and conserved domain: cd03229

>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.52  E-value=0.032  Score=34.69  Aligned_cols=28  Identities=32%  Similarity=0.611  Sum_probs=20.4

Q ss_conf             9998788999678999999971894895789
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQLSTGD   33 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~is~gd   33 (201)
T Consensus        29 ~~ivGpSG~GKSTllr~i~---Gl~~p~~G~   56 (178)
T cd03229          29 VALLGPSGSGKSTLLRCIA---GLEEPDSGS   56 (178)
T ss_conf             9999999983999999998---599999639