HHsearch alignment for GI: 254780240 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=94.69 E-value=0.024 Score=35.42 Aligned_cols=23 Identities=30% Similarity=0.413 Sum_probs=20.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 69998788999678999999971
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQKL 24 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~~ 24 (201)
T Consensus 32 ~v~ivG~sGsGKSTLl~ll~gl~ 54 (220)
T cd03245 32 KVAIIGRVGSGKSTLLKLLAGLY 54 (220)
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999985999999996725