HHsearch alignment for GI: 254780240 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.18 E-value=0.018 Score=36.18 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=20.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 699987889996789999999718
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQKLN 25 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~~~ 25 (201)
T Consensus 31 ~vaivG~sGsGKSTLl~ll~gl~~ 54 (229)
T cd03254 31 TVAIVGPTGAGKTTLINLLMRFYD 54 (229)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999999999809999999966866