HHsearch alignment for GI: 254780240 and conserved domain: cd03294

>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.87  E-value=0.02  Score=35.93  Aligned_cols=21  Identities=29%  Similarity=0.477  Sum_probs=17.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHH
Q ss_conf             999878899967899999997
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQK   23 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~   23 (201)
T Consensus        53 ~~ivG~SGsGKSTLLr~i~GL   73 (269)
T cd03294          53 FVIMGLSGSGKSTLLRCINRL   73 (269)
T ss_pred             EEEECCCCCHHHHHHHHHHCC
T ss_conf             999989984899999999759