HHsearch alignment for GI: 254780240 and conserved domain: cd04150
>cd04150 Arf1_5_like Arf1-Arf5-like subfamily. This subfamily contains Arf1, Arf2, Arf3, Arf4, Arf5, and related proteins. Arfs1-5 are soluble proteins that are crucial for assembling coat proteins during vesicle formation. Each contains an N-terminal myristoylated amphipathic helix that is folded into the protein in the GDP-bound state. GDP/GTP exchange exposes the helix, which anchors to the membrane. Following GTP hydrolysis, the helix dissociates from the membrane and folds back into the protein. A general feature of Arf1-5 signaling may be the cooperation of two Arfs at the same site. Arfs1-5 are generally considered to be interchangeable in function and location, but some specific functions have been assigned. Arf1 localizes to the early/cis-Golgi, where it is activated by GBF1 and recruits the coat protein COPI. It also localizes to the trans-Golgi network (TGN), where it is activated by BIG1/BIG2 and recruits the AP1, AP3, AP4, and GGA proteins. Humans, but not rodents
Probab=95.38 E-value=0.016 Score=36.47 Aligned_cols=22 Identities=36% Similarity=0.564 Sum_probs=20.0
Q ss_pred CEEEEECCCCCCHHHHHHHHHH
Q ss_conf 9699987889996789999999
Q gi|254780240|r 1 MRIIFLGPPGSGKGTQACRLSQ 22 (201)
Q Consensus 1 m~I~i~G~PGsGK~T~a~~la~ 22 (201)
T Consensus 1 ~KililG~~~sGKTsll~~l~~ 22 (159)
T cd04150 1 MRILMVGLDAAGKTTILYKLKL 22 (159)
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 9999999999998999999972