HHsearch alignment for GI: 254780240 and conserved domain: pfam01202
>pfam01202 SKI Shikimate kinase.
Probab=98.75 E-value=3.5e-07 Score=65.73 Aligned_cols=152 Identities=16% Similarity=0.223 Sum_probs=82.6
Q ss_pred CCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHCCCCCCCEEEEC---
Q ss_conf 8999678999999971894895789999999600145666677641-344554103566555420232225317863---
Q gi|254780240|r 9 PGSGKGTQACRLSQKLNVPQLSTGDMLRAEVDRNTLLGKQVKGSME-SGSLISDAIVNQVVCDRIRLPDCDSGFILD--- 84 (201)
Q Consensus 9 PGsGK~T~a~~la~~~~~~~is~gdllR~~~~~~s~~g~~i~~~l~-~G~lvpd~ii~~li~~~l~~~~~~~g~ilD--- 84 (201)
T Consensus 1 mGsGKstigk~LA~~L~~~fiD~D~~ie~~------~g~si~eif~~~Ge~~FR~~E~~~l~~l~~~~----~~VIstGG 70 (158)
T pfam01202 1 MGAGKTTIGRLLAKALGLPFIDTDQEIEKR------TGMSIAEIFEEEGEEGFRRLESEVLKELLAEH----NAVIATGG 70 (158)
T ss_pred CCCCHHHHHHHHHHHHCCCEEECHHHHHHH------HCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCC----CEEEEECC
T ss_conf 989779999999999699978872999988------78899999998198999999999999997169----94998078
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 80111245788876665312522210355542212566423311232333455656789899999999999975699999
Q gi|254780240|r 85 GYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYDVFLKRIENYRKTILPLSSY 164 (201)
Q Consensus 85 GFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD~~e~i~~Rl~~y~~~~~pv~~~ 164 (201)
T Consensus 71 G~v~~~~~~~~----L~~----~g~vi~L~~~~~~i~~Rl~~~~~RPll-----~~~~~~~~~~~---l~~-~R---~~~ 130 (158)
T pfam01202 71 GAVLSEENRDL----LRE----NGIVVYLDADPEVLLERLKADKTRPLL-----QDKDPEEELLE---LLF-ER---CPL 130 (158)
T ss_pred CCCCCHHHHHH----HHH----CCEEEEEECCHHHHHHHHCCCCCCCCC-----CCCCHHHHHHH---HHH-HH---HHH
T ss_conf 60258999999----995----792799849999999997179999989-----89987999999---999-99---999
Q ss_pred HHHCCCEEEECCC-CCHHHHHHHHHHHH
Q ss_conf 9967979999389-98899999999999
Q gi|254780240|r 165 YRDMGCLYIIDGM-LDMDEVSRSIDSLL 191 (201)
Q Consensus 165 y~~~~~l~~Idg~-~~~~eV~~~I~~~l 191 (201)
T Consensus 131 Y~~~a-~~~i~~~~~~~~ei~~~Ii~~l 157 (158)
T pfam01202 131 YEEAA-DIVVDTDESSPEEVAEEILEAL 157 (158)
T ss_pred HHHHC-CEEEECCCCCHHHHHHHHHHHH
T ss_conf 99869-9998799999999999999975