HHsearch alignment for GI: 254780240 and conserved domain: pfam02223

>pfam02223 Thymidylate_kin Thymidylate kinase.
Probab=99.43  E-value=1.5e-12  Score=99.32  Aligned_cols=163  Identities=24%  Similarity=0.263  Sum_probs=88.9

Q ss_pred             EECCCCCCHHHHHHHHHHHH---CCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH-HHHHHHH-------HC
Q ss_conf             98788999678999999971---8948957899999996001456666776413445541035-6655542-------02
Q gi|254780240|r    5 FLGPPGSGKGTQACRLSQKL---NVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLISDAIV-NQVVCDR-------IR   73 (201)
Q Consensus         5 i~G~PGsGK~T~a~~la~~~---~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lvpd~ii-~~li~~~-------l~   73 (201)
T Consensus         1 ~EGiDGsGKsTq~~~L~~~L~~~g~~v~~~----~e--p~~~~~g~~ir~~l~~~~~~~~~~~~llf~adR~~~~~~~i~   74 (186)
T pfam02223         1 IEGLDGAGKTTQAELLKERLKEQGIKVVLT----RE--PGGTPIGEKIRELLLRNEELSPLTEALLFAADRIEHLEEKIK   74 (186)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCEEEEE----EC--CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             979999899999999999999879908997----49--999837999999985012589999999999999999999999


Q ss_pred             CC-CCCCEEEECCCHH-HHH-HHH------HHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-
Q ss_conf             32-2253178638011-124-578------8876665--3125222103555422125664233112323334556567-
Q gi|254780240|r   74 LP-DCDSGFILDGYPR-TVD-QAK------SLHAFIS--NMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSD-  141 (201)
Q Consensus        74 ~~-~~~~g~ilDGFPR-t~~-Qa~------~l~~~l~--~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~D-  141 (201)
T Consensus        75 ~~l~~g~~VI~DRy~~S~~ayq~~~~~~~~~~i~~l~~~~~~~~PDlti~Ldv~pe~~~~Ri~~R~~~-------~~~e~  147 (186)
T pfam02223        75 PALKQGKTVICDRYLFSSIAYQGAAGGLGLDLVLSLNPDVPGPKPDLTFLLDVDPEVALKRLRRRGEL-------DEFEF  147 (186)
T ss_pred             HHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCC-------CHHHH
T ss_conf             99976998996073134899876204778999999987206789998999838999999999866875-------62765


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
Q ss_conf             8989999999999997569999999679799993899889999999
Q gi|254780240|r  142 DKYDVFLKRIENYRKTILPLSSYYRDMGCLYIIDGMLDMDEVSRSI  187 (201)
Q Consensus       142 D~~e~i~~Rl~~y~~~~~pv~~~y~~~~~l~~Idg~~~~~eV~~~I  187 (201)
T Consensus       148 e~~~~~~kv~~~Y~-------~l~~~~~~~~~IDa~~~i~ev~~~I  186 (186)
T pfam02223       148 EQLDFLRKVRERYL-------ELAKDDERILIIDASNSIEEVHEEI  186 (186)
T ss_pred             CCHHHHHHHHHHHH-------HHHCCCCCEEEEECCCCHHHHHHHC
T ss_conf             17999999999999-------9976999789987999999997049