HHsearch alignment for GI: 254780240 and conserved domain: pfam05496

>pfam05496 RuvB_N Holliday junction DNA helicase ruvB N-terminus. The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair. Branch migration is catalysed by the RuvB protein that is targeted to the Holliday junction by the structure specific RuvA protein. This family contains the N-terminal region of the protein.
Probab=97.57  E-value=7.1e-05  Score=51.30  Aligned_cols=26  Identities=35%  Similarity=0.662  Sum_probs=23.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCE
Q ss_conf             99987889996789999999718948
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQ   28 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~   28 (201)
T Consensus        53 ~lf~GPPG~GKTTlAriiAk~~~~~~   78 (234)
T pfam05496        53 VLLYGPPGLGKTTLANIIANEMGVNI   78 (234)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCE
T ss_conf             78878999988899999998408753