HHsearch alignment for GI: 254780241 and conserved domain: PRK08568
>PRK08568 preprotein translocase subunit SecY; Reviewed.
Probab=100.00 E-value=0 Score=776.79 Aligned_cols=394 Identities=24% Similarity=0.338 Sum_probs=335.0
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 83587889999999999999985067989873988999987303553788998642770222046873547899999999
Q gi|254780241|r 17 FSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASIIV 96 (444)
Q Consensus 17 ~~~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASIi~ 96 (444)
T Consensus 20 p~~~~~Lr~kilfTl~~l~vyrigs~IP~pGi~~---------~~~~~~~~~~~~~gga~--~SifaLGI~PyItASIIm 88 (466)
T PRK08568 20 PERHVPFKEKLKWTAIVLILYFILTNIPLYGISQ---------ASQDLFELLRIIFAGAF--GTLLTLGIGPIVTAGIIL 88 (466)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------CCCCHHHHHHHHHCCHH--HHHHHHCCHHHHHHHHHH
T ss_conf 9999988889999999999999805788999795---------75577899999866604--389993959999999999
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99985215478641146368999998869999999999999999723556762258750479999999999999999999
Q gi|254780241|r 97 QLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLG 176 (444)
Q Consensus 97 QLL~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~il~L~aGs~il~wl~ 176 (444)
T Consensus 89 QLL~--~~~l~~l~~~geeGR~ki~~~tR~ltv~la~iQa~~~~~~~~~~~~~~~~~~~~~~~~ii~~L~aGt~~lmwLg 166 (466)
T PRK08568 89 QLLV--GSKLINLDLSDPEDRAKFQGLQKLLAIVMIALEAAPFVLGGAFGPPTPLLAAGGIALLIFLQLALGGILIILLD 166 (466)
T ss_pred HHHH--HCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9987--33076665437546999999999999999999999999988504666552048899999999999999999999
Q ss_pred HHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCC----------------CC------------HHHHHHHHHHH
Q ss_conf 987408898752036210146576788743333200123----------------21------------58999999999
Q gi|254780241|r 177 EQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGS----------------IS------------TPLMLLIFSST 228 (444)
Q Consensus 177 e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~----------------~~------------~~~~l~~~~~~ 228 (444)
T Consensus 167 E~Ite~GIGNGiSLiIfagI~~~l~~~~~~~~~~~~~~~~~g~ip~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~li~~ 246 (466)
T PRK08568 167 ELVSKWGIGSGISLFIAAGVSQQIFVGLFNWLTVPGGNLPVGFIPALIYAITSGNLTLAILLGGSGRNFLLPDLLGLIAT 246 (466)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88751181630899999999999888742533345554400389999999997301157999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC--------C
Q ss_conf 99999999886533232101101211664235643114442000023799999999986888887507777--------2
Q gi|254780241|r 229 VAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSS--------S 300 (444)
Q Consensus 229 l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~--------~ 300 (444)
T Consensus 247 v~v~~~vvy~~~~~~~IPv~~~~-------~~g~~~~iPlKln~aGViPiIFAssll~~~~~~~~~~~~~~~~~~~~~~~ 319 (466)
T PRK08568 247 ILVFLLVVYLESMRVEIPLAHGR-------VRGARGRYPLKFIYVSVLPVILVRALQANIQLFGQLLQSIGIPILGTYSG 319 (466)
T ss_pred HHHHHEEEEEECCEEEECCCCCC-------CCCCCCEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
T ss_conf 99885167640114651123343-------47877501314304464469999999986999999988603056653057
Q ss_pred HHHHHHHHHHCCCCC------------CHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHCCCCCCCCCCCHHH-HHH
Q ss_conf 479998875306676------------3169999999999999998623-79899999999638844762798579-999
Q gi|254780241|r 301 PTWIVGLVDSLGHGR------------SFYMVLYSVFIVFFAFFYTAIV-FNPKEAADNLKKHGGFIPGIRPGDRT-ALH 366 (444)
Q Consensus 301 ~~~~~~~~~~~~~~~------------~~y~i~y~ilii~Fs~f~~~i~-~~P~~iAe~L~k~g~~IpGiRPG~~T-~~y 366 (444)
T Consensus 320 ~~~~~gi~~y~~p~~~~~~~~~~p~~~~~Y~~~~~~l~i~Fs~fy~~i~~~nP~~iAenLkk~G~~IPGiRpg~~t~e~y 399 (466)
T PRK08568 320 GQPVSGLVYYLSPPNSIYDWIADPLRAVIYALFMIVLSILFAIFWVETAGLDAKDQARQLQNSGMQIPGFRRSPKVIEKV 399 (466)
T ss_pred CCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 78617899985787634566523057899999999999999999999827898999999998698165689996409999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999848841002579999999999999999999999852656431
Q gi|254780241|r 367 IDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFKK 436 (444)
Q Consensus 367 L~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~~~gGTslLI~Vgv~l~~~~qi~a~~~~~~Y~~~~~~ 436 (444)
T Consensus 400 L~~vi~rlT~~Gaifl~~ia~lp~~~~~~~------gGTslLI~VgValdt~~qi~s~~~~~~Y~~l~~~ 463 (466)
T PRK08568 400 LKRYIPPVTVIGGAIVGLLAVLADLLGALG------GGTGLLLTVSIVYQYYEEIAREQLMEMYPLLRRF 463 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998899999999999999999999998730------2688999999999999999999999880899987