HHsearch alignment for GI: 254780241 and conserved domain: PTZ00219
>PTZ00219 Sec61 protein; Provisional.
Probab=100.00 E-value=0 Score=458.63 Aligned_cols=382 Identities=19% Similarity=0.265 Sum_probs=313.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 58788999999999999998506798987398899998730355378899864277022204687354789999999999
Q gi|254780241|r 19 RAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASIIVQL 98 (444)
Q Consensus 19 ~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASIi~QL 98 (444)
T Consensus 23 ~~v~f~~Kl~wT~~~l~iylv~s~iPLyGi~--------~~~~~Dpf~~~R~i~A--s~~GTLmeLGIgPIVTa~ii~QL 92 (472)
T PTZ00219 23 RKVPFKEMLLWTGVSLFVFLVCCQIPLYGAV--------TSKSSDPFYWMRVILA--SNRGTLMELGISPIVTSSMVMQL 92 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC--------CCCCCCHHHHHHHHHC--CCCCCHHHHCCHHHHHHHHHHHH
T ss_conf 8897677799999999999998087645446--------8888885999999981--57776788484378899999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98521547864114636899999886999999999999999972355676225875047999999999999999999998
Q gi|254780241|r 99 IAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQ 178 (444)
Q Consensus 99 L~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~il~L~aGs~il~wl~e~ 178 (444)
T Consensus 93 L~G~--kiI~vd~~~~edr~lfq~~QKllaii~~~~eA~~~V~sG~yg~--~~~~g~~~~~liilQL~~~giivilLDEl 168 (472)
T PTZ00219 93 LAGS--KIIDVDQSLKEDRDLFQGAQKLLGLLITLGEAVAYVISGMYGD--ISEIGTFKAILIILQLFFAGVVVILLDEL 168 (472)
T ss_pred HHHC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8418--8155389986789999999999999999999999971033578--00233799999999999999999999999
Q ss_pred HHH-CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC------CCCCHH-----------------------HHHHHHHHH
Q ss_conf 740-88987520362101465767887433332001------232158-----------------------999999999
Q gi|254780241|r 179 ITM-RGIGNGVSLIIFSGIVAGLPSSLVSVLELGRV------GSISTP-----------------------LMLLIFSST 228 (444)
Q Consensus 179 It~-~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~------~~~~~~-----------------------~~l~~~~~~ 228 (444)
T Consensus 169 v~KG~G~GSGisLFIaa~v~~~i~w~~fsp~~~~~~~g~e~eGa~~~~~~~l~~~~~~~~~l~~af~r~~lpnl~~li~T 248 (472)
T PTZ00219 169 LQKGYGLGSGISLFIATNICETILWKAFSPTTINTDKGTEFEGALISLFYCLFTKSNKISALKEAFYRSHAPNVTNLLAT 248 (472)
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 86366603589999999999999998648530368888765333999999998077527789988742257419999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--------
Q ss_conf 999999998865332321011012116642356431144420000237999999999868888875077772--------
Q gi|254780241|r 229 VAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSS-------- 300 (444)
Q Consensus 229 l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~-------- 300 (444)
T Consensus 249 i~vf~~vvYlq~~rVeiPi~s~r-------~RG~~~~yPIkLlYtS~iPvIl~~al~sni~~~s~~l~~~~~~~~~~~lL 321 (472)
T PTZ00219 249 ALVFLIVIYLQGFRVDLSVKYQS-------VRGQQGTYPIKLFYTSNIPIILQTALVSNLYFFSQLLYRRFKNNLLVNIL 321 (472)
T ss_pred HHHHHHHHHHHCCEEEEEECCCC-------CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 99999999871356998632465-------68766422067610067519999999999999999999757864000003
Q ss_pred -----------HHHHHHHHHHCCCCC--------CHHHHHH----HHHHHHHHHHHHHHC-CCHHHHHHHHHHCCCCCCC
Q ss_conf -----------479998875306676--------3169999----999999999998623-7989999999963884476
Q gi|254780241|r 301 -----------PTWIVGLVDSLGHGR--------SFYMVLY----SVFIVFFAFFYTAIV-FNPKEAADNLKKHGGFIPG 356 (444)
Q Consensus 301 -----------~~~~~~~~~~~~~~~--------~~y~i~y----~ilii~Fs~f~~~i~-~~P~~iAe~L~k~g~~IpG 356 (444)
T Consensus 322 G~~~~~~~~g~~~Pv~Gl~yYlspP~s~~~~~~dPi~~iiy~~f~i~~~~~Fs~~Wve~sG~s~kdvAkql~~~g~~ipG 401 (472)
T PTZ00219 322 GQWQETDSHGTSIPIGGIAYYISPPNSFKDIVNDPIHTLVYISFVLVSCAVFSKTWIEVSGSSAKDVAKQLRDQQIGMVG 401 (472)
T ss_pred EEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
T ss_conf 12024577888663330589964996788886364478999999999999999999996098989999999974897798
Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 27985-799999999999999999999999999999999848841002579999999999999999999999
Q gi|254780241|r 357 IRPGD-RTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIA 427 (444)
Q Consensus 357 iRPG~-~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~~~gGTslLI~Vgv~l~~~~qi~a~~~~ 427 (444)
T Consensus 402 ~R~~~~~~~k~L~ryIP~aa~~Gg~~vG~Lav~Ad~lG~~G------sGtGiLLaV~iiy~~yE~~~~E~~~ 467 (472)
T PTZ00219 402 YRDSPPSLTKVFNRYIPTAAAFGGMCIGALTILADFLGALG------SGTGILLAVTIIYQYYEMLVKEQER 467 (472)
T ss_pred CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55674569999845564999999999999999999855876------4277999999999999999999986