HHsearch alignment for GI: 254780241 and conserved domain: PTZ00219

>PTZ00219 Sec61 protein; Provisional.
Probab=100.00  E-value=0  Score=458.63  Aligned_cols=382  Identities=19%  Similarity=0.265  Sum_probs=313.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             58788999999999999998506798987398899998730355378899864277022204687354789999999999
Q gi|254780241|r   19 RAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASIIVQL   98 (444)
Q Consensus        19 ~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASIi~QL   98 (444)
T Consensus        23 ~~v~f~~Kl~wT~~~l~iylv~s~iPLyGi~--------~~~~~Dpf~~~R~i~A--s~~GTLmeLGIgPIVTa~ii~QL   92 (472)
T PTZ00219         23 RKVPFKEMLLWTGVSLFVFLVCCQIPLYGAV--------TSKSSDPFYWMRVILA--SNRGTLMELGISPIVTSSMVMQL   92 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC--------CCCCCCHHHHHHHHHC--CCCCCHHHHCCHHHHHHHHHHHH
T ss_conf             8897677799999999999998087645446--------8888885999999981--57776788484378899999999


Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98521547864114636899999886999999999999999972355676225875047999999999999999999998
Q gi|254780241|r   99 IAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQ  178 (444)
Q Consensus        99 L~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~il~L~aGs~il~wl~e~  178 (444)
T Consensus        93 L~G~--kiI~vd~~~~edr~lfq~~QKllaii~~~~eA~~~V~sG~yg~--~~~~g~~~~~liilQL~~~giivilLDEl  168 (472)
T PTZ00219         93 LAGS--KIIDVDQSLKEDRDLFQGAQKLLGLLITLGEAVAYVISGMYGD--ISEIGTFKAILIILQLFFAGVVVILLDEL  168 (472)
T ss_pred             HHHC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8418--8155389986789999999999999999999999971033578--00233799999999999999999999999


Q ss_pred             HHH-CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC------CCCCHH-----------------------HHHHHHHHH
Q ss_conf             740-88987520362101465767887433332001------232158-----------------------999999999
Q gi|254780241|r  179 ITM-RGIGNGVSLIIFSGIVAGLPSSLVSVLELGRV------GSISTP-----------------------LMLLIFSST  228 (444)
Q Consensus       179 It~-~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~------~~~~~~-----------------------~~l~~~~~~  228 (444)
T Consensus       169 v~KG~G~GSGisLFIaa~v~~~i~w~~fsp~~~~~~~g~e~eGa~~~~~~~l~~~~~~~~~l~~af~r~~lpnl~~li~T  248 (472)
T PTZ00219        169 LQKGYGLGSGISLFIATNICETILWKAFSPTTINTDKGTEFEGALISLFYCLFTKSNKISALKEAFYRSHAPNVTNLLAT  248 (472)
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             86366603589999999999999998648530368888765333999999998077527789988742257419999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--------
Q ss_conf             999999998865332321011012116642356431144420000237999999999868888875077772--------
Q gi|254780241|r  229 VAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSS--------  300 (444)
Q Consensus       229 l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~--------  300 (444)
T Consensus       249 i~vf~~vvYlq~~rVeiPi~s~r-------~RG~~~~yPIkLlYtS~iPvIl~~al~sni~~~s~~l~~~~~~~~~~~lL  321 (472)
T PTZ00219        249 ALVFLIVIYLQGFRVDLSVKYQS-------VRGQQGTYPIKLFYTSNIPIILQTALVSNLYFFSQLLYRRFKNNLLVNIL  321 (472)
T ss_pred             HHHHHHHHHHHCCEEEEEECCCC-------CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf             99999999871356998632465-------68766422067610067519999999999999999999757864000003


Q ss_pred             -----------HHHHHHHHHHCCCCC--------CHHHHHH----HHHHHHHHHHHHHHC-CCHHHHHHHHHHCCCCCCC
Q ss_conf             -----------479998875306676--------3169999----999999999998623-7989999999963884476
Q gi|254780241|r  301 -----------PTWIVGLVDSLGHGR--------SFYMVLY----SVFIVFFAFFYTAIV-FNPKEAADNLKKHGGFIPG  356 (444)
Q Consensus       301 -----------~~~~~~~~~~~~~~~--------~~y~i~y----~ilii~Fs~f~~~i~-~~P~~iAe~L~k~g~~IpG  356 (444)
T Consensus       322 G~~~~~~~~g~~~Pv~Gl~yYlspP~s~~~~~~dPi~~iiy~~f~i~~~~~Fs~~Wve~sG~s~kdvAkql~~~g~~ipG  401 (472)
T PTZ00219        322 GQWQETDSHGTSIPIGGIAYYISPPNSFKDIVNDPIHTLVYISFVLVSCAVFSKTWIEVSGSSAKDVAKQLRDQQIGMVG  401 (472)
T ss_pred             EEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
T ss_conf             12024577888663330589964996788886364478999999999999999999996098989999999974897798


Q ss_pred             CCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             27985-799999999999999999999999999999999848841002579999999999999999999999
Q gi|254780241|r  357 IRPGD-RTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIA  427 (444)
Q Consensus       357 iRPG~-~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~~~gGTslLI~Vgv~l~~~~qi~a~~~~  427 (444)
T Consensus       402 ~R~~~~~~~k~L~ryIP~aa~~Gg~~vG~Lav~Ad~lG~~G------sGtGiLLaV~iiy~~yE~~~~E~~~  467 (472)
T PTZ00219        402 YRDSPPSLTKVFNRYIPTAAAFGGMCIGALTILADFLGALG------SGTGILLAVTIIYQYYEMLVKEQER  467 (472)
T ss_pred             CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             55674569999845564999999999999999999855876------4277999999999999999999986