HHsearch alignment of GI: 254780241 and MMDB domain: 2zjs_Y_12-195

>2zjs_Y (Y:12-195) Preprotein translocase SECY subunit; translocon, SEC, protein-conducting-channel, membrane, protein transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_Y
Probab=100.00  E-value=0  Score=377.12  Aligned_cols=179  Identities=44%  Similarity=0.846  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             78899999999999999850679898739889999873035537889986427702220468735478999999999998
Q gi|254780241|r   21 KDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASIIVQLIA  100 (444)
Q Consensus        21 ~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASIi~QLL~  100 (444)
                      ||+|+|++||++++++||+|++||+||+|.+++++..+.++++++++++.++|||++|+|+|+|||+|||||||+||||+
T Consensus         1 ~el~~Ki~~Tl~~l~i~rlg~~IplpGi~~~~~~~~~~~~~~~~~~~~~~~sgga~~~~SifsLGI~P~ItasIi~QlL~   80 (184)
T 2zjs_Y            1 PELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKIQEFLRTAQGGVFGIINLFSGGNFERFSIFALGIMPYITAAIIMQILV   80 (184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCBCTTBCHHHHHHHHHSSGGGTTHHHHHHTTSCGGGTBTTSSTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88999999999999999996238899869999999987345307889998616653105299862489999999999998


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             52154786411463689999988699999999999999997235567-----6225875047999999999999999999
Q gi|254780241|r  101 ATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQ-----GIVSDSDYFFVFSTIITLLGGTMFLVWL  175 (444)
Q Consensus       101 ~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~-----~~~~~~~~~~~~~~il~L~aGs~il~wl  175 (444)
                      ..+|+++|+|||||+||||+|++|||+|+++|++||++++.++++.+     ....+++..+.+.++++|++|+++++|+
T Consensus        81 ~~~p~l~~~~~~~~~gr~k~~~~tr~ltl~~a~iqa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~i~~wl  160 (184)
T 2zjs_Y           81 TVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWM  160 (184)
T ss_dssp             HHSHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSSSTTBCTTCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             57310765321324469999999999999999999999999985057764014656804789999999999999999999


Q ss_pred             HHHHHHCCCCCCCHHHHCCCHHHH
Q ss_conf             998740889875203621014657
Q gi|254780241|r  176 GEQITMRGIGNGVSLIIFSGIVAG  199 (444)
Q Consensus       176 ~e~It~~GIGnG~SLiI~~gIi~~  199 (444)
                      ||+|||||+|||+|++|++||+++
T Consensus       161 ~e~it~~GiGnG~SliI~~~I~~~  184 (184)
T 2zjs_Y          161 AERITEYGIGNGTSLIIFAGIVVE  184 (184)
T ss_dssp             HHHHHHTSSSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             888765512667123443647874