HHsearch alignment of GI: 254780241 and MMDB domain: 2zjs_Y_211-434

>2zjs_Y (Y:211-434) Preprotein translocase SECY subunit; translocon, SEC, protein-conducting-channel, membrane, protein transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_Y
Probab=100.00  E-value=0  Score=428.49  Aligned_cols=222  Identities=32%  Similarity=0.656  Sum_probs=211.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             21589999999999999999988653323210110121166423564311444200002379999999998688888750
Q gi|254780241|r  216 ISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFI  295 (444)
Q Consensus       216 ~~~~~~l~~~~~~l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~  295 (444)
                      .+....++.++.++++++++||+|+++||||+||+|+..+++.++++++|+|+|+||+||||+||||+++++|+++++++
T Consensus         2 ~~~~~~l~~~~~~l~~~~~~v~~~~~~~kIPi~~~~~~~~~~~~~~~~~ylPiKln~aGvmPiIfassll~~p~~i~~~~   81 (224)
T 2zjs_Y            2 VNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYARKVVGGRVYGGQATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPF   81 (224)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECC-------CCCCEEEEEEESSSCTHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHCC
T ss_conf             31479999999999999999999974541201211331354345787403432022001423799999886478876304


Q ss_pred             CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             77772479998875306676316999999999999999862379899999999638844762798579999999999999
Q gi|254780241|r  296 DVSSSPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVT  375 (444)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~y~i~y~ilii~Fs~f~~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit  375 (444)
                      ++.   .+..++.+++++++++|.++|++++++|+|||+.+++||||+||||+|||++|||+||||+|++||+|+++|+|
T Consensus        82 ~~~---~~~~~~~~~l~~~~~~~~i~y~~lii~f~~f~s~~~~~p~diAe~Lkk~g~~IpGirpG~~T~~yL~k~i~~~t  158 (224)
T 2zjs_Y           82 QDN---PVLQGIANFFNPTRPSGLFIEVLLVILFTYVYTAVQFDPKRIAESLREYGGFIPGIRPGEPTVKFLEHIVSRLT  158 (224)
T ss_dssp             TTC---HHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHTTTTTEECTTBCSSHHHHHHHHHHHHHHH
T ss_pred             CCH---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             413---67888888617887469999999999999999997088899999999779884375898668999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999999999984884-10025799999999999999999999998526564311016
Q gi|254780241|r  376 VVGAGYLVCVCIFPEALIAVTGVP-VSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFKKSRSK  440 (444)
Q Consensus       376 ~~Ga~~l~~la~~p~~~~~~~~~~-~~~gGTslLI~Vgv~l~~~~qi~a~~~~~~Y~~~~~~~~~~  440 (444)
                      ++||++++++|++|++++..++.+ ..+||||+||+||+++|++||+++++.+++|++++||+|.|
T Consensus       159 ~~Ga~~l~~ia~~p~l~~~~~~~~~~~~ggTslLI~Vgv~~~~~~qi~~~~~~~~Y~~~~k~~~~~  224 (224)
T 2zjs_Y          159 LWGALFLGLVTLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVESQLMLRSYEGFLSRGRLR  224 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCCCGGGSSHHHHHHHHHHHHHHHHHHHHHHHC------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999999999999999983767636633878858999999999999999998707886324689