HHsearch alignment of GI: 254780241 and MMDB domain: 2zjs_Y_211-434
>2zjs_Y (Y:211-434) Preprotein translocase SECY subunit; translocon, SEC, protein-conducting-channel, membrane, protein transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_Y
Probab=100.00 E-value=0 Score=428.49 Aligned_cols=222 Identities=32% Similarity=0.656 Sum_probs=211.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21589999999999999999988653323210110121166423564311444200002379999999998688888750
Q gi|254780241|r 216 ISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFI 295 (444)
Q Consensus 216 ~~~~~~l~~~~~~l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~ 295 (444)
.+....++.++.++++++++||+|+++||||+||+|+..+++.++++++|+|+|+||+||||+||||+++++|+++++++
T Consensus 2 ~~~~~~l~~~~~~l~~~~~~v~~~~~~~kIPi~~~~~~~~~~~~~~~~~ylPiKln~aGvmPiIfassll~~p~~i~~~~ 81 (224)
T 2zjs_Y 2 VNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYARKVVGGRVYGGQATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPF 81 (224)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECC-------CCCCEEEEEEESSSCTHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHCC
T ss_conf 31479999999999999999999974541201211331354345787403432022001423799999886478876304
Q ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 77772479998875306676316999999999999999862379899999999638844762798579999999999999
Q gi|254780241|r 296 DVSSSPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVT 375 (444)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~y~i~y~ilii~Fs~f~~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit 375 (444)
++. .+..++.+++++++++|.++|++++++|+|||+.+++||||+||||+|||++|||+||||+|++||+|+++|+|
T Consensus 82 ~~~---~~~~~~~~~l~~~~~~~~i~y~~lii~f~~f~s~~~~~p~diAe~Lkk~g~~IpGirpG~~T~~yL~k~i~~~t 158 (224)
T 2zjs_Y 82 QDN---PVLQGIANFFNPTRPSGLFIEVLLVILFTYVYTAVQFDPKRIAESLREYGGFIPGIRPGEPTVKFLEHIVSRLT 158 (224)
T ss_dssp TTC---HHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHTTTTTEECTTBCSSHHHHHHHHHHHHHHH
T ss_pred CCH---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 413---67888888617887469999999999999999997088899999999779884375898668999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999984884-10025799999999999999999999998526564311016
Q gi|254780241|r 376 VVGAGYLVCVCIFPEALIAVTGVP-VSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFKKSRSK 440 (444)
Q Consensus 376 ~~Ga~~l~~la~~p~~~~~~~~~~-~~~gGTslLI~Vgv~l~~~~qi~a~~~~~~Y~~~~~~~~~~ 440 (444)
++||++++++|++|++++..++.+ ..+||||+||+||+++|++||+++++.+++|++++||+|.|
T Consensus 159 ~~Ga~~l~~ia~~p~l~~~~~~~~~~~~ggTslLI~Vgv~~~~~~qi~~~~~~~~Y~~~~k~~~~~ 224 (224)
T 2zjs_Y 159 LWGALFLGLVTLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVESQLMLRSYEGFLSRGRLR 224 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCCGGGSSHHHHHHHHHHHHHHHHHHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999999999983767636633878858999999999999999998707886324689