HHsearch results for GI: 254780241 and protein with PDBid: 2akh_Y
>2akh_Y Preprotein translocase SECY subunit; protein transport, translocation, transmembrane, transport; 14.90A {Escherichia coli} PDB: 2aki_Y
Probab=100.00 E-value=0 Score=757.50 Aligned_cols=387 Identities=50% Similarity=0.890 Sum_probs=365.1
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
Q ss_conf 98835878899999999999999850679898739889999873035537889986427702220468735478999999
Q gi|254780241|r 15 ASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASI 94 (444)
Q Consensus 15 ~~~~~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASI 94 (444)
+...+.+|+|||++||++++.+||+|+++ |+|+|||+|||||||
T Consensus 11 ~~~~~~~~l~~ri~ftl~~l~~~~~Gs~i------------------------------------SifsLGI~PyItAsI 54 (400)
T 2akh_Y 11 SAKGGLGELKRRLLFVIGALIVFRIGSFI------------------------------------SIFALGIMPYISASI 54 (400)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHH
T ss_conf 88450899999999999999999966699------------------------------------999965499999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999985215478641146368999998869999999999999999723556---7622587504799999999999999
Q gi|254780241|r 95 IVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNG---QGIVSDSDYFFVFSTIITLLGGTMF 171 (444)
Q Consensus 95 i~QLL~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~---~~~~~~~~~~~~~~~il~L~aGs~i 171 (444)
+||||+...|+++|||||||+||||++++||++|+++|++||++++.++.+. .+...+++..+.+.++++|++||++
T Consensus 55 i~QLL~~~~p~l~~l~k~g~~gr~k~~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~~~~vl~L~~Gt~i 134 (400)
T 2akh_Y 55 IIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMF 134 (400)
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 99999987776999875167779999999999999999999999999742256645313076189999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 99999987408898752036210146576788743333200123215899999999999999999886533232101101
Q gi|254780241|r 172 LVWLGEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPK 251 (444)
Q Consensus 172 l~wl~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~~~~~~~l~~~~~~l~vi~~iV~v~~~~rrIPi~y~~ 251 (444)
+||+||+|||||+|||+||+|++||++++|+.+.+.+.....+.......++.+..+++++.++|++|+++||||++|++
T Consensus 135 l~wL~e~it~~GIGnGiSLiI~~gI~s~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~iV~~~~~~r~Ipi~~~~ 214 (400)
T 2akh_Y 135 LMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAK 214 (400)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_conf 99998898650758872468789887564699999887621575369999999999999999875011006888510011
Q ss_pred HHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 21166423564311444200002379999999998688888750777724799988753066763169999999999999
Q gi|254780241|r 252 RQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAF 331 (444)
Q Consensus 252 ~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~y~ilii~Fs~ 331 (444)
+..+++.++++++|+|+|+|||||||+||||+++++|++++++++......|..++..+++++.++|.++|++++++|+|
T Consensus 215 ~~~~~~~~~~~~~ylPikln~aGvmPiifassll~~p~~i~~~l~~~~~~~~~~~~~~~~~~~~~~y~~~y~~lii~f~~ 294 (400)
T 2akh_Y 215 RQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCF 294 (400)
T ss_pred HHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 32256655656530113300566359999999999999999971766425799999987089980999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 99862379899999999638844762798579999999999999999999999999999999984884100257999999
Q gi|254780241|r 332 FYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIV 411 (444)
Q Consensus 332 f~~~i~~~P~~iAe~L~k~g~~IpGiRPG~~T~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~~~gGTslLI~V 411 (444)
||+.+++||||+||||+|+|++|||+||||+|+|||+|+++|+|++||+|++++|++|++++..++.+..+||||+||+|
T Consensus 295 f~~~i~~np~~iAe~L~k~g~~IpGiRpG~~T~~yL~~~i~~lt~~Gs~~l~~la~lp~~~~~~~~~~~~~gGTsiLI~V 374 (400)
T 2akh_Y 295 FYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVV 374 (400)
T ss_pred HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 99999468999999999879841797998668999999999999999999999999999999960887015078789889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998526564311
Q gi|254780241|r 412 SVVLDTIVQIQGYLIAQQYEGVFKKS 437 (444)
Q Consensus 412 gv~l~~~~qi~a~~~~~~Y~~~~~~~ 437 (444)
||++|++||+||++.+++||+++||.
T Consensus 375 gv~~~~~~qi~a~~~~~~Y~~~l~k~ 400 (400)
T 2akh_Y 375 VVIMDFMAQVQTLMMSSQYESALKKA 400 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999899888884469