HHsearch results for GI: 254780241 and protein with PDBid: 3mp7_A
>3mp7_A Preprotein translocase subunit SECY; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus}
Probab=100.00 E-value=0 Score=744.82 Aligned_cols=396 Identities=22% Similarity=0.337 Sum_probs=334.8
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
Q ss_conf 98835878899999999999999850679898739889999873035537889986427702220468735478999999
Q gi|254780241|r 15 ASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFSLGIMPYISASI 94 (444)
Q Consensus 15 ~~~~~~~el~~Kil~Tl~il~iyrlg~~IPlPGid~~~~~~~~~~~~~~~~~~l~~~sGga~~~~sif~LGI~PyItASI 94 (444)
.+-.|++|||||++||++++++||+|++||+||+|. +.+++++++++++|| +++|+|+|||+|||||||
T Consensus 18 ~~p~~~~~lr~rilfTl~~l~iyrig~~IPlpGi~~---------~~~~~~~~l~~~~gg--~~~SlfaLGI~PyItASI 86 (482)
T 3mp7_A 18 ERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPE---------RIQDYFQFLRVVLAG--RNGSILTLGIGPIVTAGI 86 (482)
T ss_dssp --------CTTTHHHHHHHHHHHHHHHHSBCTTCCS---------SCCCSCSSTTTTTCS--CTTBTTSSTTHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------CHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHH
T ss_conf 697889987889999999999999972387899892---------234099999998667--765899965899999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999852154786411463689999988699999999999999997235567622587504799999999999999999
Q gi|254780241|r 95 IVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVW 174 (444)
Q Consensus 95 i~QLL~~~~P~l~~l~kege~gr~ki~~~tr~ltl~~a~iQs~~~~~~l~~~~~~~~~~~~~~~~~~il~L~aGs~il~w 174 (444)
+||||+ .|+++|+|||||+||||+|++|||+|+++|++||++++.+.... ....+++..+.+.++++|++||+++||
T Consensus 87 ImQLL~--~~~l~~l~~~g~~gr~ki~~~tr~ltl~la~iqa~~~~~~~~~~-~~~~~~~~~~~~livl~L~aGt~~lmw 163 (482)
T 3mp7_A 87 ILQLLV--GSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGGAFG-RVGVDVTYAIAVLMILQLAMGGIVLII 163 (482)
T ss_dssp HTTC-------------------------CHHHHHHHHHHHHHHHHHSSSSS-CC------CTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999987--14266643126656999999999999999999999999861357-642366499999999999999999999
Q ss_pred HHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCC--------C----------------------CHHHHHHH
Q ss_conf 99987408898752036210146576788743333200123--------2----------------------15899999
Q gi|254780241|r 175 LGEQITMRGIGNGVSLIIFSGIVAGLPSSLVSVLELGRVGS--------I----------------------STPLMLLI 224 (444)
Q Consensus 175 l~e~It~~GIGnG~SLiI~~gIi~~lp~~l~~~~~~~~~~~--------~----------------------~~~~~l~~ 224 (444)
|||+|||||+|||+|++|++||++++|++..+.+....... . .....++.
T Consensus 164 L~E~It~~GIGnGiSLiI~~gI~~~i~~~~~~~~~~~~~~~~~~~~~~ivg~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 243 (482)
T 3mp7_A 164 LDELVSKWGIGSGISLFIAAGVSQTILTRSLNPLTDPNIIDPLTGQPAIVGAIPYFIQHILKGDLWGAIYRGGSAPDMLS 243 (482)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHSCCCCCCC---CCSSSCCCSCHHHHHHHHHHHCCSCSSCCCSSSSCCHHH
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 99998634877771488899999886787504323444356555640288899999999998765434542121889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC-----
Q ss_conf 999999999999886533232101101211664235643114442000023799999999986888887507777-----
Q gi|254780241|r 225 FSSTVAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSS----- 299 (444)
Q Consensus 225 ~~~~l~vi~~iV~v~~~~rrIPi~y~~~~~~~~~~~~~~sylPiKin~aGvmPiIfassll~~p~~i~~~~~~~~----- 299 (444)
+..++++++++||+|+++||||+||+++. .++++|+|+|++|+||+||++++++.|.++++++....
T Consensus 244 ~~~~i~v~~~vv~~~~~~~~IPv~~~~~~--------~~~~~Pikl~~ag~iPiifass~~~~~~~~~~~l~~~~~~~l~ 315 (482)
T 3mp7_A 244 VVATIVVFFIVVYFESMRVEIPLGYRGVT--------VRGSYPIRFLYVSNIPIILTFALYANIQLWARVLDRLGHPWLG 315 (482)
T ss_dssp HHHHHHHHHHHHHHHHCCEEC--------------------CEECSSSSTTHHHHHHHHHHHHHHHHHHHHHTTSCCSSB
T ss_pred HHHHHHHHHHHHHHCCEEEEECCCCCCCC--------CCCCCCEECCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999987521014786012223222--------3576660033031142679999999899999998751530342
Q ss_pred -----CHHHHHHHHHHCCC------------CCCHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf -----24799988753066------------763169999999999999998623-798999999996388447627985
Q gi|254780241|r 300 -----SPTWIVGLVDSLGH------------GRSFYMVLYSVFIVFFAFFYTAIV-FNPKEAADNLKKHGGFIPGIRPGD 361 (444)
Q Consensus 300 -----~~~~~~~~~~~~~~------------~~~~y~i~y~ilii~Fs~f~~~i~-~~P~~iAe~L~k~g~~IpGiRPG~ 361 (444)
...+..++..++.+ +.++|.++|++++++|+|||+.++ +||||+||||||+|+||||+||||
T Consensus 316 ~~~~~~~~~i~g~~~y~~~p~~~~~~~~~p~~~i~Y~i~~~~l~~~Fs~fy~~i~~~~p~~iAenLkk~G~~IpGiRPG~ 395 (482)
T 3mp7_A 316 RFDPTTGSPISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQRAGLQIPGFRRDP 395 (482)
T ss_dssp CCCCTTSCCCCBSGGGSCCCSSSTHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHSSTTGGGCCC--------CCTTTTTT
T ss_pred HCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 03644477124567762897538887527501799999999999999999998607899999999998598188889996
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79-999999999999999999999999999999984884100257999999999999999999999985265643110
Q gi|254780241|r 362 RT-ALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFKKSR 438 (444)
Q Consensus 362 ~T-~~yL~~v~~rit~~Ga~~l~~la~~p~~~~~~~~~~~~~gGTslLI~Vgv~l~~~~qi~a~~~~~~Y~~~~~~~~ 438 (444)
+| ++||+|+++|+|++||+|++++|++|++++... +|||+||+|||++||+||+|+|+.+++|++++|+-.
T Consensus 396 ~T~~~yL~~~i~rit~~Gai~l~~iavlp~~lg~~~------~GTslLI~VgV~~~~~~qi~~~~~~~~Y~~l~k~~g 467 (482)
T 3mp7_A 396 RTLEKVLQRYIPYVTFWGSLTVALIAVLADFLGALG------TGTGILLTVGILYRFYEEIAREQITEMFPALRKLFG 467 (482)
T ss_dssp STTCC------CTHHHHHHHHHHHHHHHHHHHTCSS------CSHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 409999999999999999999999999999998843------437689999999999999999999987289999718