PSIBLAST alignment of GI: 254780241 and protein with PDB id: 2akh
>gi|83754005|pdb|2AKH|Y Chain Y, Normal Mode-Based Flexible Fitted Coordinates Of A Non- Translocating Secyeg Protein-Conducting Channel Into The Cryo-Em Map Of A Secyeg-Nascent Chain-70s Ribosome Complex From E. Coli Length = 400
>gi|83754008|pdb|2AKH|B Chain B, Normal Mode-Based Flexible Fitted Coordinates Of A Non- Translocating Secyeg Protein-Conducting Channel Into The Cryo-Em Map Of A Secyeg-Nascent Chain-70s Ribosome Complex From E. Coli Length = 400
Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats.
Identities = 191/419 (45%), Positives = 272/419 (64%), Gaps = 39/419 (9%)
Query: 22 DLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAV 81
+LK R++F I ALIV+R G++I ++
Sbjct: 18 ELKRRLLFVIGALIVFRIGSFI------------------------------------SI 41
Query: 82 FSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAV 141
F+LGIMPYISASII+QL+ P+L +KKEGE GR+ I+QYTRY T++L I Q+ GIA
Sbjct: 42 FALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIAT 101
Query: 142 GLKNGQGI---VSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVA 198
GL N G+ V + + F F+ +++L+ GTMFL+WLGEQIT RGIGNG+S+IIF+GIVA
Sbjct: 102 GLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVA 161
Query: 199 GLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNRM 258
GLP ++ +E R G + ++LL+ AV V+F ER QRR+++ Y KRQ G R+
Sbjct: 162 GLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRV 221
Query: 259 FQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIVGLVDSLGHGRSFY 318
+ ++LPLK+N AGV+P+IFASS++L PATI + + W+ + L G+ Y
Sbjct: 222 YAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLY 281
Query: 319 MVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTALHIDYVLTRVTVVG 378
++LY+ I+FF FFYTA+VFNP+E ADNLKK G F+PGIRPG++TA +ID V+TR+T+VG
Sbjct: 282 VLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVG 341
Query: 379 AGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLIAQQYEGVFKKS 437
A Y+ +C+ PE + VP GTSLLI+V V++D + Q+Q +++ QYE KK+
Sbjct: 342 ALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKA 400