PSIBLAST alignment of GI: 254780241 and protein with PDB id: 2yxq
>gi|157836736|pdb|2YXQ|A Chain A, The Plug Domain Of The Secy Protein Stablizes The Closed State Of The Translocation Channel And Maintains A Membrane Seal Length = 431
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 69/426 (16%), Positives = 150/426 (35%), Gaps = 64/426 (15%)
Query: 24 KSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFS 83
K ++ +T I L++Y I + ++ IF + + +
Sbjct: 24 KEKLKWTGIVLVLYFIMGCIDVY---------TAGAQIPAIFEFWGRI-------GTLIT 67
Query: 84 LGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGL 143
LGI P ++A II+QL+ + + + + R + + ++++ ++A
Sbjct: 68 LGIGPIVTAGIIMQLLVGS--GIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGA- 124
Query: 144 KNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVAGL--- 200
G F II + G++ L++L E ++ GIG+G+ L I +G+ +
Sbjct: 125 ----GAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVG 180
Query: 201 ---PSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNR 257
P + + + + T+ V +V++ E + + + + + +
Sbjct: 181 ALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVG 240
Query: 258 MFQDDVSYLPLKLNTAGVVPSIFASSLLLLPA--------TIMGFIDVSSSPTWIVGLVD 309
+ P+K +P I A++L + + + G+
Sbjct: 241 KY-------PIKFVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAY 293
Query: 310 SLGHGR------------SFYMVLYSVFIVFFAFFYT-AIVFNPKEAADNLKKHGGFIPG 356
L YM+ + V F F+ +PK A + G I G
Sbjct: 294 YLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKG 353
Query: 357 IRPG-DRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVL 415
R + + +TV+ + ++ + + A+ GT +L+ VS+V
Sbjct: 354 FRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALG------GGTGVLLTVSIVY 407
Query: 416 DTIVQI 421
Q+
Sbjct: 408 RMYEQL 413