PSIBLAST alignment of GI: 254780241 and protein with PDB id: 3din
gi|209156622|pdb|3DIN|C Chain C, Crystal Structure Of The Protein-Translocation Complex Formed By The Secy Channel And The Seca Atpase Length = 431
>gi|209156626|pdb|3DIN|F Chain F, Crystal Structure Of The Protein-Translocation Complex Formed By The Secy Channel And The Seca Atpase Length = 431
Score = 363 bits (933), Expect = 3e-98, Method: Composition-based stats.
Identities = 158/438 (36%), Positives = 272/438 (62%), Gaps = 19/438 (4%)
Query: 14 FASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQ-----SKSAGIFGLF 68
F + + +L+ RI+FT +ALIV+R G YIP+P ++ ++ + F+ + AGI +
Sbjct: 5 FKNAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFY 64
Query: 69 NMFSGGAVERMAVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYAT 128
++F+GGA+ R +VF++ + PYI+ASII+QL+A+ +PSL+ + +EGE+GRK +YTR T
Sbjct: 65 DVFTGGALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLT 124
Query: 129 VLLGILQAYGIAVGLKNGQGIVSDSDYFFVFSTIIT---LLGGTMFLVWLGEQITMRGIG 185
+L+G QA+ ++ L + + T+++ +L GTMFL+WLGE+IT +GIG
Sbjct: 125 LLIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIG 184
Query: 186 NGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRL 245
NG+S++IF+GIVA PS + +G ++ + + + + I +I ++A+RR+
Sbjct: 185 NGISILIFAGIVARYPSYIRQ----AYLGGLNLLEWIFLIAVALITIFGIILVQQAERRI 240
Query: 246 LIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIV 305
IQY +R G R++ +YLP+K+N GV+P IFAS+++ +P+ I +
Sbjct: 241 TIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNNE------- 293
Query: 306 GLVDSLGHGRSFYMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTAL 365
L + G Y+++Y + + FF +FY+ ++F+P+E ++N++K+GG+IPG+RPG T
Sbjct: 294 TLKNLFRAGGFLYLLIYGLLVFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRSTEQ 353
Query: 366 HIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYL 425
++ VL RVT +GA +LV + + P + V V + GTS LI V V LD I Q++ ++
Sbjct: 354 YLHRVLNRVTFIGAVFLVVIALLPYLVQGAIKVNVWIGGTSALIAVGVALDIIQQMETHM 413
Query: 426 IAQQYEGVFKKSRSKKKN 443
+ + YEG KK + + +
Sbjct: 414 VMRHYEGFIKKGKIRGRR 431