PSIBLAST alignment of GI: 254780241 and protein with PDB id: 3dkn

>gi|197107393|pdb|3DKN|A Chain A, Sec61 In The Canine Ribosome-Channel Complex From The Endoplasmic Reticulum Length = 430

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 70/425 (16%), Positives = 152/425 (35%), Gaps = 59/425 (13%)

Query: 24  KSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSGGAVERMAVFS 83
           K ++ +T I L++Y     I +             ++   IF  +   +  A     + +
Sbjct: 23  KEKLKWTGIVLVLYFIMGCIDVY---------TAGAQIPAIFEFWQTIT--ASRIGTLIT 71

Query: 84  LGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGILQAYGIAVGL 143
           LGI P ++A II+QL+  +   +  +     + R +     +  ++++  ++A       
Sbjct: 72  LGIGPIVTAGIIMQLLVGS--GIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGA- 128

Query: 144 KNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIFSGIVAGL--- 200
               G          F  II +  G++ L++L E ++  GIG+G+ L I +G+   +   
Sbjct: 129 ----GAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVG 184

Query: 201 ---PSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNR 257
              P   +       +  +     +     T+ V  +V++ E  +  + + + + +    
Sbjct: 185 ALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVG 244

Query: 258 MFQDDVSYLPLKLNTAGVVPSIFASSLLLLPA--------TIMGFIDVSSSPTWIVGLVD 309
            +       P+K      +P I A++L               +  +        + G+  
Sbjct: 245 KY-------PIKFVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAY 297

Query: 310 SLGHGR------------SFYMVLYSVFIVFFAFFYT-AIVFNPKEAADNLKKHGGFIPG 356
            L                  YM+   +  V F  F+      +PK  A  +   G  I G
Sbjct: 298 YLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKG 357

Query: 357 IRPGDRTALHIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLD 416
            R        +   +  +TV+ + ++  +      + A+        GT +L+ VS+V  
Sbjct: 358 FRKS-AIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALG------GGTGVLLTVSIVYR 410

Query: 417 TIVQI 421
              Q+
Sbjct: 411 MYEQL 415