RPSBLAST alignment of GI: 254780241 and MMDB domain: 1rh5_A_
>1rh5_A (A:) Preprotein translocase SECY subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii}Length = 436
Score = 288 bits (737), Expect = 1e-78
Identities = 69/453 (15%), Positives = 153/453 (33%), Gaps = 59/453 (13%)
Query: 14 FASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQSKSAGIFGLFNMFSG 73
+ K ++ +T I L++Y I + + + +
Sbjct: 14 VELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAG-----------AQIPAIFEFWQTI 62
Query: 74 GAVERMAVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYATVLLGI 133
A + +LGI P ++A II+QL+ + + + R + + ++++
Sbjct: 63 TASRIGTLITLGIGPIVTAGIIMQLL--VGSGIIQMDLSIPENRALFQGCQKLLSIIMCF 120
Query: 134 LQAYGIAVGLKNGQGIVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIGNGVSLIIF 193
++A G F II + G++ L++L E ++ GIG+G+ L I
Sbjct: 121 VEAVLFVGAGAFG-----ILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIA 175
Query: 194 SGIVAGLPSSLVSVLEL------GRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRLLI 247
+G+ + + + + + T+ V +V++ E + + +
Sbjct: 176 AGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPL 235
Query: 248 QYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSS-------- 299
+ + + P+K +P I A++L +
Sbjct: 236 AHGRIKGAV-------GKYPIKFVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYE 288
Query: 300 ------------SPTWIVGLVDSLGHGRSFYMVLYSVFIVFFAFFYTAI-VFNPKEAADN 346
S + + V S YM+ + V F F+ +PK A
Sbjct: 289 GGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKR 348
Query: 347 LKKHGGFIPGIRPGDRTALH-IDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGT 405
+ G I G R ++ H + + +TV+ + ++ + + GT
Sbjct: 349 IGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANF------IGALGGGT 402
Query: 406 SLLIIVSVVLDTIVQIQGYLIAQQYEGVFKKSR 438
+L+ VS+V Q+ ++ + + K
Sbjct: 403 GVLLTVSIVYRMYEQLLRERTSELHPAIAKLLN 435