RPSBLAST alignment of GI: 254780241 and MMDB domain: 2ww9_A_241-490
>2ww9_A (A:241-490) SEC sixty-one protein homolog; ribonucleoprotein, transmembrane, phosphoprotein, signal sequence, membrane, ribosome, cytoplasm; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_ALength = 250
Score = 147 bits (372), Expect = 3e-36
Identities = 35/256 (13%), Positives = 76/256 (29%), Gaps = 49/256 (19%)
Query: 222 LLIFSSTVAVIALVIFFERAQRRLLIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFA 281
L +A+ +V + + + L I+ + + N + P+KL G + +F+
Sbjct: 7 LTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTN-------NVYPIKLLYTGCLSVLFS 59
Query: 282 SSLLLLPATIMGFIDVS----------------------------------SSPTWIVGL 307
++L + + PT
Sbjct: 60 YTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHYENANNLLAVPTFPLSLLAPPTSFFKG 119
Query: 308 VDSLGHGRSFYMVLYSVFIVFFAFFYTAI-VFNPKEAADNLKKHGGFIPGIRPGDRTALH 366
V Y V ++FA + AI + ++ A K G + G R + A
Sbjct: 120 VTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQN-VAKE 178
Query: 367 IDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYLI 426
++ V+ V GA L + + E+L + +++ ++ + I
Sbjct: 179 LNKVIPIAAVTGASVLSLITVIGESL------GLKGKAAGIVVGIAGGFSLLEVITIEYQ 232
Query: 427 AQQYEGVFKKSRSKKK 442
+ +
Sbjct: 233 QSGGQSALNQVLGVPG 248