RPSBLAST alignment of GI: 254780241 and protein with PDBid: 3din
>3din_C Preprotein translocase subunit SECY; protein translocation, membrane protein, ATPase, ATP- binding, cytoplasm, inner membrane, nucleotide-binding; HET: ADP; 4.50A {Thermotoga maritima MSB8} Length = 431
Score = 337 bits (866), Expect = 3e-93
Identities = 157/435 (36%), Positives = 269/435 (61%), Gaps = 19/435 (4%)
Query: 14 FASFSRAKDLKSRIVFTIIALIVYRFGTYIPLPSIDFISYSKAFQ-----SKSAGIFGLF 68
F + + +L+ RI+FT +ALIV+R G YIP+P ++ ++ + F+ + AGI +
Sbjct: 5 FKNAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFY 64
Query: 69 NMFSGGAVERMAVFSLGIMPYISASIIVQLIAATVPSLENLKKEGEQGRKVINQYTRYAT 128
++F+GGA+ R +VF++ + PYI+ASII+QL+A+ +PSL+ + +EGE+GRK +YTR T
Sbjct: 65 DVFTGGALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLT 124
Query: 129 VLLGILQAYGIAVGLKNGQG---IVSDSDYFFVFSTIITLLGGTMFLVWLGEQITMRGIG 185
+L+G QA+ ++ L + F + +++L GTMFL+WLGE+IT +GIG
Sbjct: 125 LLIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIG 184
Query: 186 NGVSLIIFSGIVAGLPSSLVSVLELGRVGSISTPLMLLIFSSTVAVIALVIFFERAQRRL 245
NG+S++IF+GIVA PS + +G ++ + + + + I +I ++A+RR+
Sbjct: 185 NGISILIFAGIVARYPSYIRQA----YLGGLNLLEWIFLIAVALITIFGIILVQQAERRI 240
Query: 246 LIQYPKRQVGNRMFQDDVSYLPLKLNTAGVVPSIFASSLLLLPATIMGFIDVSSSPTWIV 305
IQY +R G R++ +YLP+K+N GV+P IFAS+++ +P+ I + +
Sbjct: 241 TIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNNETLKNL-- 298
Query: 306 GLVDSLGHGRSFYMVLYSVFIVFFAFFYTAIVFNPKEAADNLKKHGGFIPGIRPGDRTAL 365
G Y+++Y + + FF +FY+ ++F+P+E ++N++K+GG+IPG+RPG T
Sbjct: 299 -----FRAGGFLYLLIYGLLVFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRSTEQ 353
Query: 366 HIDYVLTRVTVVGAGYLVCVCIFPEALIAVTGVPVSLSGTSLLIIVSVVLDTIVQIQGYL 425
++ VL RVT +GA +LV + + P + V V + GTS LI V V LD I Q++ ++
Sbjct: 354 YLHRVLNRVTFIGAVFLVVIALLPYLVQGAIKVNVWIGGTSALIAVGVALDIIQQMETHM 413
Query: 426 IAQQYEGVFKKSRSK 440
+ + YEG KK + +
Sbjct: 414 VMRHYEGFIKKGKIR 428