HHsearch alignment for GI: 254780242 and conserved domain: PRK04005
>PRK04005 50S ribosomal protein L18e; Provisional.
Probab=99.09 E-value=5.4e-11 Score=77.79 Aligned_cols=77 Identities=23% Similarity=0.395 Sum_probs=58.9
Q ss_pred CCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEE
Q ss_conf 85301167635546565521477511204543024555332233555543086254433204630443144148999982
Q gi|254780242|r 54 MPLYRRLPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKAKVVLRVSGA 133 (151)
Q Consensus 54 ~Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~ki~I~v~~~ 133 (151)
T Consensus 18 a~iwk~Va~rL~~--prr~r~~vnLskI~r~~k-----~~~~v---------vV-----pGKVLg~g~l~~kvtV~A~~f 76 (111)
T PRK04005 18 APIWKDVAERLEK--PRRKRAEVNLSKINRYAK-----EGDVV---------VV-----PGKVLGSGKLDKKVTVAALSF 76 (111)
T ss_pred CHHHHHHHHHHHC--CCCCCCCCCHHHHHHHCC-----CCCEE---------EE-----EEEECCCCEECCCEEEEEEEC
T ss_conf 8789999999825--554689867999998577-----89989---------99-----888818877867779999757
Q ss_pred CHHHHHHHHHCCCEEEEC
Q ss_conf 699999999749889989
Q gi|254780242|r 134 SASAVEKVEKLGGQVIVI 151 (151)
Q Consensus 134 S~sA~ekIE~aGG~v~ii 151 (151)
T Consensus 77 S~~A~~kI~~aGG~~it~ 94 (111)
T PRK04005 77 SETAKEKIEEAGGECLTI 94 (111)
T ss_pred CHHHHHHHHHCCCEEEEH
T ss_conf 989999999809989779