HHsearch results for GI: 254780242 and protein with PDBid: 2zkr_o
>2zkr_o 60S ribosomal protein L18; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=98.58 E-value=4.2e-08 Score=61.60 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=55.1
Q ss_pred CEEEECCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCC--CEEEEEEE
Q ss_conf 5301167635546565521477511204543024555332233555543086254433204630443144--14899998
Q gi|254780242|r 55 PLYRRLPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSDGDLKA--KVVLRVSG 132 (151)
Q Consensus 55 Pl~rrlPKrGF~~~~~~~~~~iNL~~L~~~i~~~~~~~~~~Id~~~L~~~gli~~~~~~vKiLg~Gel~~--ki~I~v~~ 132 (151)
|+++.+-+|=| ..+.++.+|||+.|+.+.....- +++++ +| .=|||++|.|.. +++|-+..
T Consensus 42 ~f~k~VakRL~--~srrnr~~vnLSrI~r~~k~~~~-e~~~v---------VV-----vGkVl~dgrl~~vPKltV~AL~ 104 (188)
T 2zkr_o 42 TFNQVVLKRLF--MSRTNRPPLSLSRMIRKMKLPGR-ENKTA---------VV-----VGTVTDDVRILEVPKLKVCALR 104 (188)
T ss_dssp HHHHHHHHHHH--SCTTTSCEEEHHHHHSCSSSCCS-TTSEE---------EE-----EEEEECSSCCCCCSSCCEEEEE
T ss_pred HHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHCCCC-CCCEE---------EE-----ECCCCCCCEEECCCCEEEEEEE
T ss_conf 88999999973--54336897549999998304576-68748---------88-----6126487102036754899997
Q ss_pred ECHHHHHHHHHCCCEEEEC
Q ss_conf 2699999999749889989
Q gi|254780242|r 133 ASASAVEKVEKLGGQVIVI 151 (151)
Q Consensus 133 ~S~sA~ekIE~aGG~v~ii 151 (151)
||++|+++|++|||+|..+
T Consensus 105 fS~~Ar~kI~~aGGk~lT~ 123 (188)
T 2zkr_o 105 VSSRARSRILKAGGKILTF 123 (188)
T ss_dssp ECHHHHHHHHHHSSCEEEH
T ss_pred ECHHHHHHHHHCCCEEEEH
T ss_conf 1378999999759879769