PSIBLAST alignment of GI: 254780242 and protein with PDB id: 1p85
gi|33357911|pdb|1P85|J Chain J, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome Length = 144
>gi|33357939|pdb|1P86|J Chain J, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome Length = 144
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 1 MKLNEISYDKGSCKVKKRVARGIGSGTGKTAGRGVKGQKSRSGVS-VRGFEGGQMPLYRR 59
M+LN +S +GS K KR+ RGIGSG GKT GRG KGQKSRSG RGFEGGQMPLYRR
Sbjct: 1 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR 60
Query: 60 LPKRGFVNIAGSDFVTISLGLLQAYIDKDRLDCSSEIDASVLVASGLVRRSQRGIRILSD 119
LPK GF + + I L L +D + L A+ ++ +++
Sbjct: 61 LPKFGFTSRKAAITAEIRLSDLAKV-------EGGVVDLNTLKAANIIGIQIEFAKVILA 113
Query: 120 GDLKAKVVLRVSGASASAVEKVEKLGGQVI 149
G++ V +R + A +E GG++
Sbjct: 114 GEVTTPVTVRGLRVTKGARAAIEAAGGKIE 143