HHsearch alignment for GI: 254780244 and conserved domain: CHL00138

>CHL00138 rps5 ribosomal protein S5; Validated.
Probab=100.00  E-value=0  Score=311.38  Aligned_cols=127  Identities=39%  Similarity=0.692  Sum_probs=124.2

Q ss_pred             HCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCC
Q ss_conf             00001160210000224440127873846799999808998389970474424789999999996301252201668762
Q gi|254780244|r   15 REERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDGRTLH   94 (199)
Q Consensus        15 ~~~~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~~TI~   94 (199)
T Consensus        13 ~~~~~~~~~e~vi~i~rV~k~tkgGr~~~f~alVvVGn~~G~vG~G~gKa~ev~~AI~KA~~~Akknl~~V~~~~~~TIp   92 (139)
T CHL00138         13 LIEQENKWEERVIQIKRVSKVVKGGKKLSFRAIVVIGNENGWVGVGVGKASDVQGAVKKAVTDAKKNIINIPLTKSNSIP   92 (139)
T ss_pred             CHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCEEEEECCCCCEEE
T ss_conf             20130573068898985543622893667999999977999798878853419999999999996269999812896488


Q ss_pred             EECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECC
Q ss_conf             00110337679999636754485030489999998094410045468
Q gi|254780244|r   95 HDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIG  141 (199)
Q Consensus        95 h~v~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~G  141 (199)
T Consensus        93 h~v~gk~gs~~V~l~Pap~G~Gliag~~ir~ilelaGIkDv~~K~~G  139 (139)
T CHL00138         93 HNITGIFGAAKVILRPSAPGSGVIAGGSIRTVLELAGIKNILAKQLG  139 (139)
T ss_pred             EEEEEEECCEEEEEEECCCCCCEECCHHHHHHHHHCCCCEEEEECCC
T ss_conf             99999986389999989999868858099999997695305466259