HHsearch alignment of GI: 254780244 and MMDB domain: 1pkp_A_1-78
>1pkp_A (A:1-78) Ribosomal protein S5; 2.80A {Geobacillus stearothermophilus}
Probab=99.90 E-value=6.4e-24 Score=165.79 Aligned_cols=75 Identities=48% Similarity=0.789 Sum_probs=72.1
Q ss_pred HHCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECC
Q ss_conf 100001160210000224440127873846799999808998389970474424789999999996301252201
Q gi|254780244|r 14 NREERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLL 88 (199)
Q Consensus 14 ~~~~~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~ 88 (199)
..+...++|+|++|+|+||||||++||++||+|||+|||+||+||||.|||.|+++||+||.++|++||++||+.
T Consensus 3 ~~d~~~~~l~~~vl~i~rV~k~tk~Gr~~~f~alvvvGn~~G~vG~G~gKa~ev~~Ai~kA~~~Ak~nl~~V~l~ 77 (78)
T 1pkp_A 3 RINPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIV 77 (78)
T ss_dssp -CCGGGSCCEEEEEEEECSSSBCSSCCSSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHTTSCEECCCB
T ss_pred CCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCEEEEECC
T ss_conf 557775762068999965545840883478999999966998786605635667999999999998261388212