HHsearch alignment of GI: 254780244 and MMDB domain: 2vqe_E_1-143
>2vqe_E (E:1-143) 30S ribosomal protein S5; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=339.05 Aligned_cols=142 Identities=42% Similarity=0.686 Sum_probs=139.1
Q ss_pred CCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCEEC
Q ss_conf 01160210000224440127873846799999808998389970474424789999999996301252201668762001
Q gi|254780244|r 18 RDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDGRTLHHDG 97 (199)
Q Consensus 18 ~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~~TI~h~v 97 (199)
..++|+|+||+|+||+|||++||++||+|||+|||+||++|||+||+.|+++|++||.++|++||++|+++++ ||||++
T Consensus 2 ~~~~l~~~vl~v~rv~k~Tk~Gr~~~f~alvvvGn~~G~vG~G~gK~~e~~~Ai~kA~~~A~~nl~~V~~~~~-Ti~~~v 80 (143)
T 2vqe_E 2 PETDFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNG-TIPHEI 80 (143)
T ss_dssp ---CCEEEEEEEEEEEEEETTEEEEEEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHHTTSEEECCCSTT-SCSSCE
T ss_pred CCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCC-CCCEEE
T ss_conf 7326305889997466670489526799999983798535462113666478999999975088799955576-040886
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 103376799996367544850304899999980944100454689888899999999995069
Q gi|254780244|r 98 VGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGSSNPHNVIRATFEVLRSQS 160 (199)
Q Consensus 98 ~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS~N~~NvvkAt~~AL~~~~ 160 (199)
+++|++++|+|+|+|+|+||+||+.+++||+++||+||++|++||+||+|+++|||+||.+|+
T Consensus 81 ~gk~~s~~v~l~p~p~G~Gl~~~~~i~~il~laGI~dv~~k~~Gs~n~~n~vkA~~~aL~~~~ 143 (143)
T 2vqe_E 81 EVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLR 143 (143)
T ss_dssp EEEETTEEEEEEECCTTSCEESCHHHHHHHHTTTCCSEEEEEEECCCHHHHHHHHHHHHHHCC
T ss_pred EEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 665242279998545566653317889999880722442328899988999999999998179