HHsearch results for GI: 254780244 and protein with PDBid: 3bbn_E
>3bbn_E Ribosomal protein S5; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00 E-value=0 Score=400.89 Aligned_cols=167 Identities=37% Similarity=0.575 Sum_probs=160.8
Q ss_pred HHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCC
Q ss_conf 12210000116021000022444012787384679999980899838997047442478999999999630125220166
Q gi|254780244|r 11 NWQNREERDNSIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKRNMISVSLLDG 90 (199)
Q Consensus 11 ~~~~~~~~~~~l~ekvi~v~RV~k~tkgGr~~sf~alvvvGn~~G~vG~G~GKa~ev~~Ai~KA~~~Akknli~V~~~~~ 90 (199)
...+++...++|+|+||+|+||+|||+|||++||+|||+|||+||+||||+|||.|+++||+||+++|++||++|+++++
T Consensus 141 ~~~r~~~~~~ef~EkVV~I~RV~KvTKGGR~~sFrALVVVGNgnG~VG~G~GKA~EV~~AIrKA~~~AKkNLi~V~~~~~ 220 (308)
T 3bbn_E 141 SKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKY 220 (308)
T ss_dssp ----------CCEEEEEEEECCEEEETTEEEECCEEEEEEECSSSEEEEEEEECSSHHHHHHHHHHTTTTSCEECCCCSS
T ss_pred CCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCEEEEECCCC
T ss_conf 64324454567001777585112240588715789999995799968678771566899999999999714898857679
Q ss_pred CCCCEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf 87620011033767999963675448503048999999809441004546898888999999999950699899998619
Q gi|254780244|r 91 RTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMHDVVAKSIGSSNPHNVIRATFEVLRSQSHPRDVANRRG 170 (199)
Q Consensus 91 ~TI~h~v~gk~g~~kV~l~Pap~G~Gi~a~~~vr~il~laGI~dv~aK~~GS~N~~NvvkAt~~AL~~~~t~~~iA~~RG 170 (199)
|||||++.+|||+++|+|+|||+|+||+||+.++.||+++||+||++|++||+|++|+++|||+||.+++|+++||+.||
T Consensus 221 ~TIPh~V~gK~gstkV~LkPAP~GTGIiAg~~vR~ILelAGIkDv~tKs~GS~N~lNvvKATf~AL~~lrS~eeIA~~RG 300 (308)
T 3bbn_E 221 LTFPHRNEADYGAARVMLRPAAPGTGVIAGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARDRG 300 (308)
T ss_dssp SBCSSCEEEEETTEEEEEEECCTTCCEECCTTTHHHHTTTTCCBEEEEEEECCCTTTTTTHHHHHHHTCCCHHHHHTTSC
T ss_pred CCCCEEEEEEECCEEEEEECCCCCCCEECCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHC
T ss_conf 86785777787425999835998989743809999999679472777767788788899999999983699999999849
Q ss_pred CCHHHHH
Q ss_conf 9798944
Q gi|254780244|r 171 IKHSLLQ 177 (199)
Q Consensus 171 ~~i~~~~ 177 (199)
++++|+.
T Consensus 301 k~i~EL~ 307 (308)
T 3bbn_E 301 IPMEELW 307 (308)
T ss_dssp CCSCCCC
T ss_pred CCHHHHC
T ss_conf 9678863