PSIBLAST alignment of GI: 254780244 and protein with PDB id: 2zkq
>gi|187609259|pdb|2ZKQ|EE Chain e, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 179
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKR 80
S+ D ++ I V G+R F V +GD VG ++EV A+R A AK
Sbjct: 9 SLKDEVLKIVPVQKQTRAGQRTRFKAFVAIGDHNGHVGLGVKCSKEVATAIRGAIILAKL 68
Query: 81 NMISVSL-------LDGRTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMH 133
+++ V T+ GR G+ V + A GTG+++ + + + G+
Sbjct: 69 SIVPVRRGYWGNKIGKPHTVPCKVTGRSGSVPVRLIPAPRGTGIVSAPVPKKLLMMAGID 128
Query: 134 DVVAKSIGSSNPH-NVIRATFEVLRSQSH 161
D + G + N +ATF+ +
Sbjct: 129 DCYTSARGCTATLGNFAKATFDAISKTYS 157