PSIBLAST alignment of GI: 254780244 and protein with PDB id: 3jyv
>gi|281500811|pdb|3JYV|E Chain E, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 162
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKR 80
+ D ++ I V G+R F +VVVGD+ VG TA+EV A+R AK
Sbjct: 1 GLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKL 60
Query: 81 NMISV-------SLLDGRTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMH 133
++I + +L +L G+ G+ V + A G+G++A A++ + ++ G+
Sbjct: 61 SVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVE 120
Query: 134 DVVAKSIG-SSNPHNVIRATFEVL 156
DV +S G + N ++A F +
Sbjct: 121 DVYTQSNGKTRTLENTLKAAFVAI 144