RPSBLAST alignment of GI: 254780244 and protein with PDBid: 2zkq
>2zkq_e 40S ribosomal protein S2E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Length = 179
Score = 124 bits (313), Expect = 1e-29
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Query: 21 SIVDRIVAINRVSTALPGGRRFAFSVLVVVGDTKSKVGFAHSTAREVPEAVRKATEAAKR 80
S+ D ++ I V G+R F V +GD VG ++EV A+R A AK
Sbjct: 9 SLKDEVLKIVPVQKQTRAGQRTRFKAFVAIGDHNGHVGLGVKCSKEVATAIRGAIILAKL 68
Query: 81 NMISV-------SLLDGRTLHHDGVGRHGAGKVIMRSAMAGTGVIAGGAIRAVCEVLGMH 133
+++ V + T+ GR G+ V + A GTG+++ + + + G+
Sbjct: 69 SIVPVRRGYWGNKIGKPHTVPCKVTGRSGSVPVRLIPAPRGTGIVSAPVPKKLLMMAGID 128
Query: 134 DVVAKSIGSSNP-HNVIRATFEVLRSQ 159
D + G + N +ATF+ +
Sbjct: 129 DCYTSARGCTATLGNFAKATFDAISKT 155