HHsearch alignment for GI: 254780245 and conserved domain: CHL00041

Probab=96.44  E-value=0.054  Score=32.69  Aligned_cols=87  Identities=18%  Similarity=0.199  Sum_probs=66.1

Q ss_pred             CEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-EECCCCCCCHHH
Q ss_conf             2499996387099999962797599998502100000134686678999999999999997799799-983898631225
Q gi|254780245|r   27 LRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV-YFDRGKHLYCGR  105 (120)
Q Consensus        27 pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v-~FDR~g~~yHGr  105 (120)
T Consensus        14 Gi~hI~~t~NNTiitlT-D~~Gn~l~~~S~G~~gfKg~rK--~T~~Aa~~aa~~~~~~a~~~Gi~~v~v~vkG-~G-~GR   88 (116)
T CHL00041         14 GVIHIQASFNNTIVTVT-DVRGRVISWSSAGACGFKGRRK--GTPFAAQTAAENAIRTVIDQGMKRAEVMIKG-PG-LGR   88 (116)
T ss_pred             EEEEEEECCCCEEEEEE-CCCCCEEEEECCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC-CC-CCH
T ss_conf             79999944798899998-4999999998077311588876--8988999999999999997398499999978-88-458


Q ss_pred             HHHHHHHHHHCCCC
Q ss_conf             99999999965878
Q gi|254780245|r  106 IAALADAVRKGGVS  119 (120)
Q Consensus       106 vka~ad~~R~~Gl~  119 (120)
T Consensus        89 ~~a-ik~l~~~glk  101 (116)
T CHL00041         89 DTA-LRAIRRSGLK  101 (116)
T ss_pred             HHH-HHHHHHCCCE
T ss_conf             999-9999878988