HHsearch alignment for GI: 254780245 and conserved domain: PRK05309
>PRK05309 30S ribosomal protein S11; Validated.
Probab=96.46 E-value=0.063 Score=32.31 Aligned_cols=87 Identities=23% Similarity=0.243 Sum_probs=65.6
Q ss_pred CEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-EECCCCCCCHHH
Q ss_conf 2499996387099999962797599998502100000134686678999999999999997799799-983898631225
Q gi|254780245|r 27 LRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV-YFDRGKHLYCGR 105 (120)
Q Consensus 27 pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v-~FDR~g~~yHGr 105 (120)
T Consensus 17 GivhI~ss~NNTiitlT-D~~Gn~l~~~S~G~~gfKg~rK--~T~~Aa~~aa~~~~~~~~~~Gi~~v~V~ikG~-G-~GR 91 (126)
T PRK05309 17 GVAHIHATFNNTIVTIT-DRQGNAISWASAGGSGFKGSRK--STPYAAQVAAEDAAKKAKEHGMKTVEVFVKGP-G-SGR 91 (126)
T ss_pred EEEEEEECCCCEEEEEE-CCCCCEEEEEECCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC-C-CCH
T ss_conf 08999944798899998-3999999998077502588765--66669999999999999972971999999778-8-338
Q ss_pred HHHHHHHHHHCCCC
Q ss_conf 99999999965878
Q gi|254780245|r 106 IAALADAVRKGGVS 119 (120)
Q Consensus 106 vka~ad~~R~~Gl~ 119 (120)
T Consensus 92 ~~a-ir~L~~~gik 104 (126)
T PRK05309 92 ESA-IRALQAAGLE 104 (126)
T ss_pred HHH-HHHHHHCCCE
T ss_conf 999-9999878988