HHsearch alignment for GI: 254780245 and conserved domain: cd00432

>cd00432 Ribosomal_L18_L5e Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA depends on the binding of L18 and L5 to 5S rRNA. L18/L5e is generally described as L18 in prokaryotes and archaea, and as L5e (or L5) in eukaryotes. In bacteria, the CP proteins L5, L18, and L25 are required for the ribosome to incorporate 5S rRNA into the large subunit, one of the last steps in ribosome assembly. In archaea, both L18 and L5 bind 5S rRNA; in eukaryotes, only the L18 homolog (L5e) binds 5S rRNA but a homolog to L5 is also identified.
Probab=100.00  E-value=1.9e-34  Score=225.05  Aligned_cols=96  Identities=51%  Similarity=0.744  Sum_probs=93.1

Q ss_pred             CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             87882499996387099999962797599998502100000134686678999999999999997799799983898631
Q gi|254780245|r   23 SRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSVYFDRGKHLY  102 (120)
Q Consensus        23 ~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~y  102 (120)
T Consensus         8 ~~~~pRl~V~~Snk~i~aqiid~~~~~tl~sasT~~~~~~~~~~~~~n~~aA~~vG~~la~r~~~~gi~~vvfDrg~~~y   87 (103)
T cd00432           8 TQERPRLVVRKSNKHIYAQIIDDSGDKTLVSASTLELAIKGVLGSGNNVEAAYLVGRLLAKRALEKGIKKVVFDRGGYRY   87 (103)
T ss_pred             CCCCCEEEEEEECCEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             89998899998189389999985999599999714065531236886299999999999999998799889986799976


Q ss_pred             HHHHHHHHHHHHHCCC
Q ss_conf             2259999999996587
Q gi|254780245|r  103 CGRIAALADAVRKGGV  118 (120)
Q Consensus       103 HGrvka~ad~~R~~Gl  118 (120)
T Consensus        88 hgrv~a~a~~~re~Gl  103 (103)
T cd00432          88 HGRVKALAKGAREGGL  103 (103)
T ss_pred             CHHHHHHHHHHHHCCC
T ss_conf             3799999999998589