HHsearch alignment of GI: 254780245 and MMDB domain: 3i1m_K_
>3i1m_K (K:) 30S ribosomal protein S11; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_K* 3e1a_C 3e1c_C 1vs5_K 3i1o_K 3i1q_K 3i1s_K 3i1z_K 3i21_K 2qal_K* 1p6g_K 1p87_K 2aw7_K 2avy_K 2i2u_K 2i2p_K* 2qan_K* 2qb9_K* 2qbb_K* 2qbd_K ...
Probab=97.06 E-value=0.0031 Score=39.70 Aligned_cols=87 Identities=18% Similarity=0.120 Sum_probs=64.6
Q ss_pred CCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--EECCCCCCCH
Q ss_conf 82499996387099999962797599998502100000134686678999999999999997799799--9838986312
Q gi|254780245|r 26 RLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV--YFDRGKHLYC 103 (120)
Q Consensus 26 ~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v--~FDR~g~~yH 103 (120)
...+.|+-|..|..+++. |..|.+++..|+-...|++... ..-.||..+++.+++++++.||+.| +|.--|+-=+
T Consensus 18 ~giihI~~s~NNT~vt~T-d~~g~~~~~~S~G~~GfK~~rk--~t~~Aa~~~a~~~~~~~~~~Gi~~v~v~~kG~G~gr~ 94 (129)
T 3i1m_K 18 DGVAHIHASFNNTIVTIT-DRQGNALGWATAGGSGFRGSRK--STPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRE 94 (129)
T ss_dssp EEEEEEEECSSCEEEEEE-ETTCCCCEEEETGGGSCCGGGT--TSHHHHHHHHHHHHTTTGGGCCCEEEEEEESSSTTSS
T ss_pred CCEEEEEECCCCEEEEEE-CCCCCEEEEEECCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHH
T ss_conf 618999923787899998-6999988898434432267544--4367999999999999998298299999979778617
Q ss_pred HHHHHHHHHHHHCCCC
Q ss_conf 2599999999965878
Q gi|254780245|r 104 GRIAALADAVRKGGVS 119 (120)
Q Consensus 104 Grvka~ad~~R~~Gl~ 119 (120)
--|++ +...||+
T Consensus 95 ~ai~~----l~~~glk 106 (129)
T 3i1m_K 95 STIRA----LNAAGFR 106 (129)
T ss_dssp HHHHH----HHTTTCC
T ss_pred HHHHH----HHCCCCE
T ss_conf 77546----5248988