HHSEARCH alignment of GI: 254780245 and SCOP domain: d2zjrl1

Alignment
>d2zjrl1 c.55.4.1 (L:8-111) Ribosomal protein L18 (L18p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00  E-value=8e-40  Score=254.21  Aligned_cols=102  Identities=55%  Similarity=0.782  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHCCC--CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             8998776875057--87882499996387099999962797599998502100000134686678999999999999997
Q gi|254780245|r   10 RRISRIRRHLKSV--SRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVK   87 (120)
Q Consensus        10 kR~~R~R~k~k~~--~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~   87 (120)
                      ||+.|++++++..  ..++|||+|||||+|||||||||++++||||+||.+++      .++|+++|..||++||+++++
T Consensus         1 kR~~R~r~k~r~~~~~~~rpRL~V~rSnkhiyaQiIDd~~~~tl~s~St~~~~------~~~~~~~a~~vG~~ia~~a~~   74 (104)
T d2zjrl1           1 RRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALK------SGNKTDTAAAVGKALAAAAAE   74 (104)
T ss_dssp             CHHHHHHHHHHSCSTTTCSEEECCCTTSSCCCCCEEETTTTEECCCCCSCSCC------TTCSSSSHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCC------CCCHHHHHHHHHHHHHHHHHH
T ss_conf             91488887774344668986799997067068999965788678762244322------453156899999999999998


Q ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             799799983898631225999999999658
Q gi|254780245|r   88 VGVKSVYFDRGKHLYCGRIAALADAVRKGG  117 (120)
Q Consensus        88 ~gI~~v~FDR~g~~yHGrvka~ad~~R~~G  117 (120)
                      +||++|+||||||+|||||+||||++||+|
T Consensus        75 kgi~~v~FDR~g~~YHGrvka~ad~~R~~G  104 (104)
T d2zjrl1          75 KGIKQVVFDRGSYKYHGRVKALADAAREGG  104 (104)
T ss_dssp             TCCCCCEECCCSSCSCSHHHHHHHHHHHHC
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf             799899987899732139999999998677


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Translational machinery components
family: Ribosomal protein L18 and S11
domain: Ribosomal protein L18 (L18p)
species: Deinococcus radiodurans [TaxId: 1299]