RPSBLAST alignment of GI: 254780245 and protein with PDBid: 1vq8
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ... Length = 187
Score = 81.1 bits (200), Expect = 5e-17
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 1 MAT----KKKVLARRISRIRRH--LKSVSRGRLRLSVCRSSKHIYGQII--DDSIGHTLV 52
MAT K + RR +R H L+ + G+ RL +S+KH+ Q++ + TL
Sbjct: 1 MATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLA 60
Query: 53 SASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSVYFDRGKH--LYCGRIAALA 110
SA S + N+ +A G L RA + GV+ D G + ++ A+
Sbjct: 61 SAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQ 120
Query: 111 DAVRKGGVS 119
+ G+
Sbjct: 121 EGAIDAGLD 129