HHsearch alignment of GI: 254780246 and MMDB domain: 2cql_A_
>2cql_A (A:) OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=180.44 Aligned_cols=86 Identities=24% Similarity=0.348 Sum_probs=80.5
Q ss_pred CCCCC-CCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCC----EEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEE
Q ss_conf 97444-64510799758999799899990694699982686----39997075899850554322013388875211258
Q gi|254780246|r 1 MSRIG-KKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDG----ISVTLQEGMLSVATINGSKKARAAWGMSRTMINNL 75 (177)
Q Consensus 1 MSrIg-k~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~----v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nm 75 (177)
||||| ++||.||++|+|+++++.++|+||+|+|+++|++. +.++.+++.+.+.++.++++++|||||+||||+||
T Consensus 8 MsrIg~k~pI~IP~gV~V~i~~~~itVkGp~G~ls~~~~~~~~~~v~~~~~~~~i~~~~~~~~kk~~a~~GT~rsli~Nm 87 (100)
T 2cql_A 8 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNM 87 (100)
T ss_dssp CCCCCCCEEECCCSSCEEEEETTEEEEEETTEEEEEECCSSCCEEEEECSSSCEEEEECCSSSTHHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCEECCCCCEEEEECCEEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 56461699586799979999699999992893699982368704899714656899951787588999989899999865
Q ss_pred EEECCEEEEEE
Q ss_conf 97511003777
Q gi|254780246|r 76 FHGVTKGYERK 86 (177)
Q Consensus 76 i~GVt~Gf~~~ 86 (177)
|+||++||+|.
T Consensus 88 I~GVt~Gf~kt 98 (100)
T 2cql_A 88 IKGVTLGSGPS 98 (100)
T ss_dssp HHHHHTSCCSC
T ss_pred EEEEECCEECC
T ss_conf 25322745068