HHsearch results for GI: 254780246 and protein with PDBid: 3jyw_H
>3jyw_H 60S ribosomal protein L9(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_H
Probab=100.00 E-value=0 Score=353.76 Aligned_cols=165 Identities=25% Similarity=0.382 Sum_probs=151.3
Q ss_pred CCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECC-CEEE-EEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECCEE
Q ss_conf 46451079975899979989999069469998268-6399-970758998505543220133888752112589751100
Q gi|254780246|r 5 GKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSD-GISV-TLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVTKG 82 (177)
Q Consensus 5 gk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~-~v~i-~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt~G 82 (177)
.++||+||++|+|+++++.++|+||+|+|+++|++ .+.+ ..+++.+.+.+++++++++|+|||+||||+|||+||++|
T Consensus 1 tk~~I~IP~~V~v~i~~~~v~vkGp~G~l~~~~~~~~~~~~~~~~~~i~~~~~~~~kk~~a~~gt~rsli~NmI~GVt~G 80 (179)
T 3jyw_H 1 TEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKG 80 (179)
T ss_dssp CEEEECCCTTCEEEEETTEEEEECSSCEEEEECCCSSCBCCCEETTEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEECCCCCEEEEECCEEEEECCCEEEEEEECCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCEEEEECCC
T ss_conf 99503779998999979999998789899999469856899938988999837986778999999998762228745575
Q ss_pred EEEEEEEECCCCEEEEC--------CCEEEEEECCCCCCCCCCCCEEEEEE--CCCCEEEEEECCHHHHHHHHHHHHCCC
Q ss_conf 37778740476301220--------42499995156765525885038997--699889999579989879998741007
Q gi|254780246|r 83 YERKLEISGVGCRAFMD--------GRNLKMSLGFSHDVLYTPLEGISIFV--SKPTEIIVSGIDKQKVGHVAAEIRSYR 152 (177)
Q Consensus 83 f~~~L~lvgvgy~v~~~--------g~~l~l~LG~sh~i~~~ip~~v~v~~--~k~~~I~i~G~dke~Vgq~AA~Ir~~r 152 (177)
|+++|+++|+||||+++ ++.|.++||||||+.++||++|++++ +++|+|+|+|+|||.||||||+| |
T Consensus 81 f~~~L~lvGvGyr~~v~~~~~~~~~~~~l~~~lG~sh~~~~~ip~gv~v~v~~~~~t~I~i~G~dke~Vgq~AA~I---r 157 (179)
T 3jyw_H 81 YKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADL---Q 157 (179)
T ss_dssp CCCEEEEECSSSCCEEECTTTTCSSEEEEESSTTCSSCEEEECCSSBCCEECSSSCSEEECCBSCSHHHHHHHHHH---H
T ss_pred EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHC---C
T ss_conf 5999999887578898762356776248998305640288458998489976799989999968999986999864---7
Q ss_pred CCCCCCCCCE--EECCEEEEEE
Q ss_conf 4798578743--4537099971
Q gi|254780246|r 153 SAEPYKGKGI--RYSGEVIIRK 172 (177)
Q Consensus 153 ~pepYKGKgI--~~~~e~I~~K 172 (177)
+||||||||| |||||||.+|
T Consensus 158 ~~~pyKgKgiR~f~dG~yi~~K 179 (179)
T 3jyw_H 158 QICRVRNKDIRKFLDGIYVSHK 179 (179)
T ss_dssp HTTCSCSSCTTTCCCEEEEEEC
T ss_pred CCCCCCCCCCCEEECCEEEEEC
T ss_conf 9963479985470167899839