HHSEARCH alignment of GI: 254780246 and SCOP domain: d1vqoe2

Alignment

Probab=99.81  E-value=7e-20  Score=133.01  Aligned_cols=87  Identities=24%  Similarity=0.295  Sum_probs=79.6

Q ss_pred             EEEEEEEE--CCCCEEEECCCEEEEE--ECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             37778740--4763012204249999--5156765525885038997699889999579989879998741007479857
Q gi|254780246|r   83 YERKLEIS--GVGCRAFMDGRNLKMS--LGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYK  158 (177)
Q Consensus        83 f~~~L~lv--gvgy~v~~~g~~l~l~--LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYK  158 (177)
                      |+|+|+++  |||+.++++|+.+.+.  ||+++++.+.+|++|++++. +++|+++|+|+|.|||+||+|++.++.   |
T Consensus         1 f~Ykmk~vyaHFPi~v~v~g~~v~I~NFlGEK~~R~~~i~~gv~v~v~-~deiiv~G~d~E~V~qtAA~Ieq~t~v---k   76 (93)
T d1vqoe2           1 WEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEID-GEELTVSGPDIEAVGQTAADIEQLTRI---N   76 (93)
T ss_dssp             EEEEEEEECSSSCCEEEEETTEEEEESGGGCSSCEEEECCTTCEEEEE-TTEEEEEESCHHHHHHHHHHHHHTTCC---S
T ss_pred             CEEEEEEEEEECCEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEC-CCEEEEECCCHHHHHHHHHHHHHHHCC---C
T ss_conf             989999999748839998288899983267745179996699806772-888999757899987889988775353---7


Q ss_pred             CCCE--EECCEEEEEEE
Q ss_conf             8743--45370999710
Q gi|254780246|r  159 GKGI--RYSGEVIIRKE  173 (177)
Q Consensus       159 GKgI--~~~~e~I~~Ke  173 (177)
                      +||+  |+||+||..|.
T Consensus        77 ~kD~R~FlDGIYv~eKp   93 (93)
T d1vqoe2          77 DKDVRVFQDGVYITRKP   93 (93)
T ss_dssp             SSCTTTCCCEEEEEECC
T ss_pred             CCCCCEEECCEEEEECC
T ss_conf             99765833488997359

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Archaeon Haloarcula marismortui [TaxId: 2238]