HHSEARCH alignment of GI: 254780246 and SCOP domain: d2cqla1

Alignment
>d2cqla1 d.141.1.1 (A:1-87) Ribosomal protein L6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=2.3e-24  Score=159.10  Aligned_cols=82  Identities=24%  Similarity=0.434  Sum_probs=74.9

Q ss_pred             CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEC-CCEEEEE---ECCEEEEEECCCCCCCHHHHHHHHHEEEEEE
Q ss_conf             97444645107997589997998999906946999826-8639997---0758998505543220133888752112589
Q gi|254780246|r    1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMS-DGISVTL---QEGMLSVATINGSKKARAAWGMSRTMINNLF   76 (177)
Q Consensus         1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~-~~v~i~~---~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi   76 (177)
                      ||+++++||.||++|+|+++++.++|+||+|+|++.|+ +.+++..   +++.+.+.++.++++++|+|||+||||+|||
T Consensus         2 ~~i~~~~~I~IP~gV~v~i~~~~i~vkGpkG~L~~~~~~~~v~~~~~~~~~~~i~v~~~~~~k~~~a~~GT~rslI~Nmi   81 (87)
T d2cqla1           2 KTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMI   81 (87)
T ss_dssp             CCCCCCEEECCCSSCEEEEETTEEEEEETTEEEEEECCSSCCEEEEECSSSCEEEEECCSSSTHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCCCEECCCCCEEEEECCEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHE
T ss_conf             67605885877999799996999999919937999924786107996123347996037877778778787999998621


Q ss_pred             EECCEE
Q ss_conf             751100
Q gi|254780246|r   77 HGVTKG   82 (177)
Q Consensus        77 ~GVt~G   82 (177)
                      +|||+|
T Consensus        82 ~GVt~G   87 (87)
T d2cqla1          82 KGVTLG   87 (87)
T ss_dssp             HHHHTS
T ss_pred             EEEECC
T ss_conf             501188


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Human (Homo sapiens) [TaxId: 9606]