RPSBLAST alignment of GI: 254780246 and protein with PDBid: 1vq8

>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ... Length = 178

 Score =  122 bits (308), Expect = 4e-29
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%)

Query: 1   MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSD-GISVTLQEGMLSVATINGSK 59
           M R+    +++P  VD   +  +I V+G  G ++  +    I V++    + + +   + 
Sbjct: 1   MPRV---ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNA 57

Query: 60  KARAAWGMSRTMINNLFHGVTKGYERKLEISGVGC--RAFMDGRNLKMSLGFSHDVLY-T 116
           K  +  G  ++ I N+FHGVT+G+E  +E+       +  ++G  + +           T
Sbjct: 58  KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRT 117

Query: 117 PLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKGIR--YSGEVIIRKEG 174
            + G +       E+ VSG D + VG  AA+I           K +R    G  I RK  
Sbjct: 118 TIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLT---RINDKDVRVFQDGVYITRKPN 174

Query: 175 KK 176
           + 
Sbjct: 175 RG 176