PSIBLAST alignment of GI: 254780247 and protein with PDB id: 2zkq
gi|187609261|pdb|2ZKQ|HH Chain h, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 130
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 1 MSCLGDMLTRIRNANLRYKPSVVI-PFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLK 59
M+ L D L I NA R K V+I P S++ R L V+ GYIGE+ ID + +
Sbjct: 4 MNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVV 63
Query: 60 VDLKYHNGASVIRKIDCVSKPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECK 119
N VI V + +++ G +++TTS G+M +AR
Sbjct: 64 NLTGRLNKCGVISPRFDVQ---LKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 120 VGGEVLCSVF 129
GG++L F
Sbjct: 121 TGGKILGFFF 130