RPSBLAST alignment of GI: 254780247 and protein with PDBid: 1i6u
>1i6u_A 30S ribosomal protein S8P; protein-RNA interactions, ribosome, RNA, X-RAY crystallography; 2.60A {Methanocaldococcus jannaschii} SCOP: d.140.1.1 Length = 130
Score = 138 bits (349), Expect = 4e-34
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 4 LGDMLTRIRNANLRYKPSVVI-PFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDL 62
L + L I N K V I P S+L RVL V++ GYIGE+ I+ G+ I +
Sbjct: 7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELI 66
Query: 63 KYHNGASVIRKIDCVSKPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGG 122
N I+ V K G + GI+IV+T++GVM+ +A++ +GG
Sbjct: 67 GKINKCGAIKPRFPVKKFGYEKFEKRYLPA---RDFGILIVSTTQGVMSHEEAKKRGLGG 123
Query: 123 EVLCSVF 129
+L V+
Sbjct: 124 RLLAYVY 130