HHsearch results for GI: 254780248 and protein with PDBid: 2vqe_N
>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...
Probab=99.87 E-value=9.4e-24 Score=164.05 Aligned_cols=54 Identities=44% Similarity=0.799 Sum_probs=50.1
Q ss_pred HHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99720860443244402214356641144042562999999996589998321469
Q gi|254780248|r 46 LQLGSLPRDGSRVRVRNRCEISGRSRGVYRDFRLSRLALRELGGVGKIPGIIKSSW 101 (101)
Q Consensus 46 ~kL~~Lprnss~tRi~NRC~~TGR~Rgv~r~f~lSRi~fRela~~G~ipGv~KaSW 101 (101)
.+++++|++ +||++|||++||||||||++||||||+|||+|+.|+||||+||||
T Consensus 8 ~k~~~~pk~--~tR~~nRC~~tGR~Rg~~r~f~lsRi~fR~la~~G~iPGv~KaSW 61 (61)
T 2vqe_N 8 EKAKRTPKF--KVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 61 (61)
T ss_dssp GGCCSCCSS--GGGCCCCCTTTCCCTTCCTTTSSCHHHHHHHHHHTCSSSCEECCC
T ss_pred HHHHCCCCC--CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCC
T ss_conf 997718998--763302125789976202452617999999997598888360679