HHSEARCH alignment of GI: 254780248 and SCOP domain: d2qaln1

Alignment

Probab=100.00  E-value=1.4e-42  Score=277.12  Aligned_cols=100  Identities=44%  Similarity=0.714  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCHHH
Q ss_conf             12689999999999999999999999998348798989999999997208604432444022143566411440425629
Q gi|254780248|r    2 AKVSAVERNKRRLRVVAKQASKRLALKKIVMDKSVTLEERFDAMLQLGSLPRDGSRVRVRNRCEISGRSRGVYRDFRLSR   81 (101)
Q Consensus         2 akks~i~rd~kRr~l~~k~~~kR~~lk~~~~~~~l~~~~r~~a~~kL~~Lprnss~tRi~NRC~~TGR~Rgv~r~f~lSR   81 (101)
                      ||||+|+||.+|++|+++|+.+|.+|++++.|+++|.|++++|+.+|++||+||||||++|||++||||||||++|||||
T Consensus         1 AKkS~i~Rd~kR~~l~~ky~~kR~~Lk~i~~n~~l~~e~r~~a~~kL~~LPrnss~tRirnRC~~TGR~Rg~~r~f~lsR   80 (100)
T d2qaln1           1 AKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSR   80 (100)
T ss_dssp             CCHHHHHHHHHHHHHHHHTGGGTGGGTTTTTSSCC----CCHHHHHHTTTTSTTCSTTCCCCCSSSCCSSSCBTTTTBCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCHH
T ss_conf             90389999999999999999999999999847789999999999998627843036888751303797653312435329


Q ss_pred             HHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999996589998321469
Q gi|254780248|r   82 LALRELGGVGKIPGIIKSSW  101 (101)
Q Consensus        82 i~fRela~~G~ipGv~KaSW  101 (101)
                      |+|||||+.|+||||+||||
T Consensus        81 i~fR~la~~G~lpGv~KaSW  100 (100)
T d2qaln1          81 IKVREAAMRGEIPGLKKASW  100 (100)
T ss_dssp             HHHHHHHHHTCSTTCEECCC
T ss_pred             HHHHHHHHCCCCCCEECCCC
T ss_conf             99999997697888622679

SCOP domain information

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Ribosomal protein S14
domain: Ribosomal protein S14
species: Escherichia coli [TaxId: 562]